RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 GRXCR2A6NFK2 248 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 MOCS3O95396 460 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 GAP43P17677 238 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 ME1P48163 572 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 PTH1RQ03431 593 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 GPBP1Q86WP2 473 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 MB21D2Q8IYB1 491 aaPredicted RBP5.01□□□□□ -1.61
UBE4A-202ENST00000431736 PRPF31Q8WWY3 499 aaKnown RBP5.01□□□□□ -1.61
UBE4A-202ENST00000431736 SLITRK1Q96PX8 696 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 PPP1R9BQ96SB3 815 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 WNT8AQ9H1J5 351 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 CFAP45Q9UL16 551 aa5.01□□□□□ -1.61
UBE4A-202ENST00000431736 SYNCRIPO60506 623 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 PRPF40AO75400 957 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 ARP10275 920 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 FGFR1P11362 822 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 GNSP15586 552 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 PEX3P56589 373 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 TFAMQ00059 246 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 PLCB2Q00722 1185 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 CSTF1Q05048 431 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 TCERG1LQ5VWI1 586 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 TRMT11Q7Z4G4 463 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 LRFN3Q9BTN0 628 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 KIF9Q9HAQ2 790 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 HESX1Q9UBX0 185 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 SLC12A6Q9UHW9 1150 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 MRPL42Q9Y6G3 142 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC195A0A1B0GUA6 201 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 CASTOR2A6NHX0 329 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 OFD1O75665 1012 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 GCNT3O95395 438 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 RALAP11233 206 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 ID4P47928 161 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 MRE11P49959 708 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 CEBPZQ03701 1054 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 CFAP58Q5T655 872 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 RABEPKQ7Z6M1 372 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 DDX42Q86XP3 938 aaKnown RBP eCLIP5□□□□□ -1.61
UBE4A-202ENST00000431736 NOX5Q96PH1 765 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 ACCSQ96QU6 501 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 GAD1Q99259 594 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 LLPHQ9BRT6 129 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 POLMQ9NP87 494 aaPredicted RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 KLK14Q9P0G3 267 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 KIAA1024Q9UPX6 916 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 GRM6O15303 877 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 CCL16O15467 120 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 IL9P15248 144 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 EDNRBP24530 442 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 YWHAHQ04917 246 aaPredicted RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 ZFYVE27Q5T4F4 411 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 SIRT2Q8IXJ6 389 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 C8orf33Q9H7E9 229 aaPredicted RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 IGSF9BQ9UPX0 1349 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 ADAMTSL1Q8N6G6 1762 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 MBTPS2O43462 519 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 LMNAP02545 664 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 C8AP07357 584 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 SCNN1GP51170 649 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 LAMTOR4Q0VGL1 99 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 HEATR6Q6AI08 1181 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 FUT10Q6P4F1 479 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 DDX53Q86TM3 631 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 RNF139Q8WU17 664 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 NECAB3Q96P71 396 aaPredicted RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 XPO6Q96QU8 1125 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 RGS18Q9NS28 235 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 TRPM5Q9NZQ8 1165 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 MEI4A8MW99 385 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 SNHG28P0DPA3 235 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 XRCC6P12956 609 aaKnown RBP eCLIP5□□□□□ -1.61
UBE4A-202ENST00000431736 CCR3P51677 355 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 TUSC3Q13454 348 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 KARSQ15046 597 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 EIF2AK1Q9BQI3 630 aaKnown RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 TTYH1Q9H313 450 aaPredicted RBP5□□□□□ -1.61
UBE4A-202ENST00000431736 HAUS2Q9NVX0 235 aa5□□□□□ -1.61
UBE4A-202ENST00000431736 TTLL13PA6NNM8 815 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 RNASEH1O60930 286 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ARIH2O95376 493 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 XPAP23025 273 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 USP39Q53GS9 565 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TSTD1Q8NFU3 115 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TMEM206Q9H813 350 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 NCOA5Q9HCD5 579 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ARHGEF3Q9NR81 526 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ADAM28Q9UKQ2 775 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 VWA3AA6NCI4 1184 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ZNF233A6NK53 670 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 CXCL10P02778 98 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 MLH1P40692 756 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SMARCB1Q12824 385 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 PTGDRQ13258 359 aa4.99□□□□□ -1.61
UBE4A-202ENST00000431736 SUZ12Q15022 739 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 TSR1Q2NL82 804 aaKnown RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 ASTLQ6HA08 431 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC62Q6P9F0 684 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms