RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 MXI1P50539 228 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 GALCP54803 685 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 MFAP3P55082 362 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 DLG4P78352 724 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 PRKCEQ02156 737 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TERF2Q15554 542 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 ZNF792Q3KQV3 632 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 MORN1Q5T089 497 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 KRT39Q6A163 491 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TRMT1LQ7Z2T5 733 aaKnown RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 PLEKHH3Q7Z736 793 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 SLFN11Q7Z7L1 901 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TPCN2Q8NHX9 752 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 AGPAT1Q99943 283 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 SYT11Q9BT88 431 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 TMEM8AQ9HCN3 771 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 DIS3Q9Y2L1 958 aaKnown RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 COQ4Q9Y3A0 265 aa13.88□□□□□ -0.19
DDX56-204ENST00000431640 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
DDX56-204ENST00000431640 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 KIF4AO95239 1232 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 FTCDO95954 541 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 ALDH1A1P00352 501 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 TGFB3P10600 412 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 MAPK4P31152 587 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 NEDD9Q14511 834 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 KCTD2Q14681 263 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 C1orf220Q5T0J3 134 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
DDX56-204ENST00000431640 LRRC57Q8N9N7 239 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
DDX56-204ENST00000431640 PARD3BQ8TEW8 1205 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 USP6NLQ92738 828 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 TMEM117Q9H0C3 514 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 SUCLA2Q9P2R7 463 aaPredicted RBP13.87□□□□□ -0.19
DDX56-204ENST00000431640 PPME1Q9Y570 386 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 WDR81Q562E7 1941 aa13.87□□□□□ -0.19
DDX56-204ENST00000431640 A0A0U1RQG5 324 aaPredicted RBP13.86□□□□□ -0.19
DDX56-204ENST00000431640 TISP43B9A030 160 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 TNFRSF8P28908 595 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 ADSSP30520 456 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 GPC3P51654 580 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
DDX56-204ENST00000431640 DMTNQ08495 405 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 CLUL1Q15846 466 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 PEX26Q7Z412 305 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 REM2Q8IYK8 340 aaPredicted RBP13.86□□□□□ -0.19
DDX56-204ENST00000431640 ABRAQ8N0Z2 381 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 DNAJC5GQ8N7S2 189 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 RFFLQ8WZ73 363 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 PSMB7Q99436 277 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 LRRC1Q9BTT6 524 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
DDX56-204ENST00000431640 FLRT1Q9NZU1 646 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 NCANO14594 1321 aa13.86□□□□□ -0.19
DDX56-204ENST00000431640 IGKV6D-21A0A0A0MT36 114 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 OATP04181 439 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 OAS2P29728 719 aaKnown RBP13.85□□□□□ -0.19
DDX56-204ENST00000431640 RFC5P40937 340 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
DDX56-204ENST00000431640 POLGP54098 1239 aaPredicted RBP13.85□□□□□ -0.19
DDX56-204ENST00000431640 TNNC1P63316 161 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 STRN3Q13033 797 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 FAM160B1Q5W0V3 765 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 SLFN12LQ6IEE8 588 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 C8orf74Q6P047 294 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 CYFIP1Q7L576 1253 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 RHOT2Q8IXI1 618 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 BSNDQ8WZ55 320 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
DDX56-204ENST00000431640 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 STIM2Q9P246 746 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 ARHGAP28Q9P2N2 729 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 GJD2Q9UKL4 321 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
DDX56-204ENST00000431640 GOLGA8IPA6NC78 632 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ZNF233A6NK53 670 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 GOLGA8JA6NMD2 632 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 KCNK3O14649 394 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 ZC3H11AO75152 810 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX56-204ENST00000431640 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
DDX56-204ENST00000431640 ADRB2P07550 413 aa13.84□□□□□ -0.19
DDX56-204ENST00000431640 GZMAP12544 262 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms