RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CCDC178Q5BJE1 867 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 IQSEC1Q6DN90 963 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 Q6YL49 198 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 PHYKPLQ8IUZ5 450 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 CMTR2Q8IYT2 770 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 C7orf31Q8N865 590 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 KIAA1958Q8N8K9 716 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 WDR66Q8TBY9 1149 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 SMG7Q92540 1137 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 RPGRQ92834 1020 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 DYDC2Q96IM9 177 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 ACAP3Q96P50 834 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 SLC46A2Q9BY10 475 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 SERHL2Q9H4I8 314 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 C14orf93Q9H972 538 aaKnown RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 PCDH12Q9NPG4 1184 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 POLR3BQ9NW08 1133 aaPredicted RBP2.93□□□□□ -1.94
CDC40-204ENST00000431461 SYBUQ9NX95 663 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 SYNPO2Q9UMS6 1093 aa2.93□□□□□ -1.94
CDC40-204ENST00000431461 ST20-MTHFSA0A0A6YYL1 179 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 UBA6A0AVT1 1052 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 K7ESF4 209 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 GPR39O43194 453 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 HOXA3O43365 443 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 FKBP9O95302 570 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 C1RP00736 705 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 MTHFD2P13995 350 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 KIF11P52732 1056 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 BCAR1P56945 870 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 TTC38Q5R3I4 469 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 SLFN12LQ6IEE8 588 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 ABHD17CQ6PCB6 329 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 FRMD7Q6ZUT3 714 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 ESPNLQ6ZVH7 1005 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 FKBP9P1Q75LS8 142 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 GRASPQ7Z6J2 395 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 ARHGEF19Q8IW93 802 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 Q8N9P0 234 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 ZNF610Q8N9Z0 462 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 SUPT20HQ8NEM7 779 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 COQ10AQ96MF6 247 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 SLC29A3Q9BZD2 475 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 OSBPL6Q9BZF3 934 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 MTFR1LQ9H019 292 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 ENKD1Q9H0I2 346 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 KCNH6Q9H252 994 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 METTL14Q9HCE5 456 aaKnown RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 HOMER2Q9NSB8 354 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 DKK2Q9UBU2 259 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 INSL6Q9Y581 213 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 EPN1Q9Y6I3 576 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 COL11A2P13942 1736 aaPredicted RBP2.92□□□□□ -1.94
CDC40-204ENST00000431461 WASHC2AQ641Q2 1341 aa2.92□□□□□ -1.94
CDC40-204ENST00000431461 SETD1BQ9UPS6 1966 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 LOC105371045A0A1W2PR82 267 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 DVL2O14641 736 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 ZNF185O15231 689 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 NRP2O60462 931 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 STC2O76061 302 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 ZFPL1O95159 310 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 CFBP00751 764 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 HNRNPLP14866 589 aaKnown RBP eCLIP2.91□□□□□ -1.94
CDC40-204ENST00000431461 GYPEP15421 78 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 ATP2A2P16615 1042 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 POU3F3P20264 500 aaPredicted RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 ABCG1P45844 678 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 AVPR1BP47901 424 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 GPR15P49685 360 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 KRT85P78386 507 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 EXOSC10Q01780 885 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 STRN3Q13033 797 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 VPS72Q15906 364 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 DDB1Q16531 1140 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 MAN2A1Q16706 1144 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 C21orf62-AS1Q17RA5 79 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 PRR16Q569H4 304 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 CCDC62Q6P9F0 684 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 FAM180AQ6UWF9 173 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 FAM83AQ86UY5 434 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 RASSF3Q86WH2 238 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 LCORLQ8N3X6 602 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 LILRA3Q8N6C8 439 aaPredicted RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 BOLLQ8N9W6 283 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 PRPF38AQ8NAV1 312 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 FAM98AQ8NCA5 519 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 GLB1L3Q8NCI6 653 aaPredicted RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 SPATA3Q8NHX4 192 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 LINC00476Q8WZB0 136 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 SLC5A5Q92911 643 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 DCLRE1CQ96SD1 692 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 CPPED1Q9BRF8 314 aaPredicted RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 SPATA5L1Q9BVQ7 753 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 WDR11Q9BZH6 1224 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 EMC7Q9NPA0 242 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 TOMM22Q9NS69 142 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 OXSMQ9NWU1 459 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 THG1LQ9NWX6 298 aaKnown RBP2.91□□□□□ -1.94
CDC40-204ENST00000431461 DNAI1Q9UI46 699 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 FRMD4BQ9Y2L6 1034 aa2.91□□□□□ -1.94
CDC40-204ENST00000431461 A0A0A6YYJ9 748 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms