RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF157P51786 506 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 CLCN3P51790 818 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 NAB2Q15742 525 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 IER5Q5VY09 327 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 FBXO38Q6PIJ6 1188 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 CRELD2Q6UXH1 353 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 RSRC2Q7L4I2 434 aaKnown RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PLEKHH3Q7Z736 793 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 NPLOC4Q8TAT6 608 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
USHBP1-203ENST00000431146 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 MSTO1Q9BUK6 570 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 PDE11AQ9HCR9 933 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 STYXL1Q9Y6J8 313 aa18.05■□□□□ 0.48
USHBP1-203ENST00000431146 TMCO5BA8MYB1 307 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 GH1P01241 217 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ABCD1P33897 745 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 USP8P40818 1118 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 CEP112Q8N8E3 955 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ZNF516Q92618 1163 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ALS2CR12Q96Q35 445 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 PSMB7Q99436 277 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-203ENST00000431146 TRPM7Q96QT4 1865 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 PTPRJQ12913 1337 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 IGKV6-21A0A0C4DH24 114 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 PIGRP01833 764 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 MCCD1P59942 119 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-203ENST00000431146 LAMC2Q13753 1193 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 TUBB2AQ13885 445 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 WHAMMP3Q1A5X7 153 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 EFCAB12Q6NXP0 572 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ZBTB33Q86T24 672 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 FBXL13Q8NEE6 735 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 SLC20A1Q8WUM9 679 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 GOLGA1Q92805 767 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 NLRP4Q96MN2 994 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 KREMEN1Q96MU8 473 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 TUBB2BQ9BVA1 445 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 TMEM134Q9H6X4 195 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ACP6Q9NPH0 428 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ERAP1Q9NZ08 941 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 JRKLQ9Y4A0 524 aa18.04■□□□□ 0.48
USHBP1-203ENST00000431146 ANO9A1A5B4 782 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 HBP1O60381 514 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 RFX1P22670 979 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 BMS1Q14692 1282 aaKnown RBP18.03■□□□□ 0.48
USHBP1-203ENST00000431146 PALB2Q86YC2 1186 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 PPP1R16BQ96T49 567 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 RAB20Q9NX57 234 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
USHBP1-203ENST00000431146 NENFQ9UMX5 172 aa18.03■□□□□ 0.48
USHBP1-203ENST00000431146 A0A0B4J269 797 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 PMM2O15305 246 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 ADCY6O43306 1168 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 MSCO60682 206 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 PALMO75781 387 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 INSRRP14616 1297 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 ZSCAN20P17040 1043 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-203ENST00000431146 SMPD1P17405 629 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 TNNI1P19237 187 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 CXCR5P32302 372 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 SLC26A2P50443 739 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 NFRKBQ6P4R8 1299 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 ZNF467Q7Z7K2 595 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-203ENST00000431146 SLC30A5Q8TAD4 765 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 TATDN2Q93075 761 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 TINF2Q9BSI4 451 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 SYT11Q9BT88 431 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 CCDC113Q9H0I3 377 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 RBAKQ9NYW8 714 aaPredicted RBP18.02■□□□□ 0.48
USHBP1-203ENST00000431146 COQ4Q9Y3A0 265 aa18.02■□□□□ 0.48
USHBP1-203ENST00000431146 RBM47A0AV96 593 aaKnown RBP18.02■□□□□ 0.47
USHBP1-203ENST00000431146 FTCDO95954 541 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 MAPK4P31152 587 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 GPC3P51654 580 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 MXD4Q14582 209 aaPredicted RBP18.02■□□□□ 0.47
USHBP1-203ENST00000431146 KIF22Q14807 665 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 SLFN12LQ6IEE8 588 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 USP37Q86T82 979 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 RNF10Q8N5U6 811 aaKnown RBP18.02■□□□□ 0.47
USHBP1-203ENST00000431146 PPTC7Q8NI37 304 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 KCNN1Q92952 543 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 MMS19Q96T76 1030 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 PPME1Q9Y570 386 aa18.02■□□□□ 0.47
USHBP1-203ENST00000431146 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 PRKCBP05771 671 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 TNFSF9P41273 254 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 DNA2P51530 1060 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 PSMD6Q15008 389 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 PRAMEF19Q5SWL8 479 aa18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CDCA2Q69YH5 1023 aaPredicted RBP18.01■□□□□ 0.47
USHBP1-203ENST00000431146 CDR2LQ86X02 465 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms