RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 AXLP30530 894 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 OR1G1P47890 313 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 ZXDAP98168 799 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 MAPK7Q13164 816 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 PTGDRQ13258 359 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 ORC2Q13416 577 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-202ENST00000430200 PTPN21Q16825 1174 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 TMC5Q6UXY8 1006 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 TRIM67Q6ZTA4 783 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 LRRC15Q8TF66 581 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 ZSCAN31Q96LW9 406 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-202ENST00000430200 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 FRYLO94915 3013 aa13.05□□□□□ -0.32
HDAC4-202ENST00000430200 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 E9PMD0 336 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 M0R296 226 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 TEX28O15482 410 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 RECQL4O94761 1208 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 SOD2P04179 222 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 ASGR2P07307 311 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 XRCC6P12956 609 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 CYP11B2P19099 503 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 CCT6AP40227 531 aaKnown RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 VCPP55072 806 aaKnown RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 TAS1R3Q7RTX0 852 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 CEP120Q8N960 986 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 MCPH1Q8NEM0 835 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 PRSS33Q8NF86 280 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 SNX29Q8TEQ0 813 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 HASPINQ8TF76 798 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 NACC1Q96RE7 527 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
HDAC4-202ENST00000430200 FAN1Q9Y2M0 1017 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 ZMYM2Q9UBW7 1377 aa13.04□□□□□ -0.32
HDAC4-202ENST00000430200 COL4A2P08572 1712 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 KIF4AO95239 1232 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 BRD1O95696 1058 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 PRKCBP05771 671 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
HDAC4-202ENST00000430200 LIG1P18858 919 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 PCBP1Q15365 356 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC4-202ENST00000430200 IER5LQ5T953 404 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-202ENST00000430200 DZANK1Q9NVP4 752 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
HDAC4-202ENST00000430200 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 RFPL2O75678 378 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 URODP06132 367 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 NAMPTP43490 491 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 GLUD2P49448 558 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 ITIH3Q06033 890 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 GRIK3Q13003 919 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 RABEP1Q15276 862 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 HAUS3Q68CZ6 603 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 PNMA5Q96PV4 448 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-202ENST00000430200 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-202ENST00000430200 SFXN1Q9H9B4 322 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-202ENST00000430200 PATJQ8NI35 1801 aa13.02□□□□□ -0.33
HDAC4-202ENST00000430200 ABLIM1O14639 778 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ADAM12O43184 909 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 ALDH2P05091 517 aa13.01□□□□□ -0.33
HDAC4-202ENST00000430200 SPATA31D3P0C874 917 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms