RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 NPTXRO95502 500 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 GARTP22102 1010 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 MCM4P33991 863 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 PNOCQ13519 176 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 NOLC1Q14978 699 aaKnown RBP eCLIP16.36■□□□□ 0.21
GARNL3-204ENST00000429629 KNOP1Q1ED39 458 aaKnown RBP16.36■□□□□ 0.21
GARNL3-204ENST00000429629 GOLGA5Q8TBA6 731 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 CLP1Q92989 425 aaKnown RBP16.36■□□□□ 0.21
GARNL3-204ENST00000429629 SAMD11Q96NU1 681 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 CASD1Q96PB1 797 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 MRPL9Q9BYD2 267 aaKnown RBP16.36■□□□□ 0.21
GARNL3-204ENST00000429629 CDT1Q9H211 546 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 PLEKHA5Q9HAU0 1116 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 RNF19AQ9NV58 838 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.36■□□□□ 0.21
GARNL3-204ENST00000429629 TCHHQ07283 1943 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 SCN5AQ14524 2016 aa16.36■□□□□ 0.21
GARNL3-204ENST00000429629 OGTO15294 1046 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 PRPF6O94906 941 aaKnown RBP16.35■□□□□ 0.21
GARNL3-204ENST00000429629 LDHAP00338 332 aaKnown RBP16.35■□□□□ 0.21
GARNL3-204ENST00000429629 DNAJB2P25686 324 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 HOXD13P35453 343 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 PPP1R2P41236 205 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 KCNA1Q09470 495 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 MYBPC2Q14324 1141 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 ZNF568Q3ZCX4 644 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 XKR4Q5GH76 650 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 ABI1Q8IZP0 508 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
GARNL3-204ENST00000429629 TRIML1Q8N9V2 468 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-204ENST00000429629 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 RSAD1Q9HA92 442 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-204ENST00000429629 KIAA1468Q9P260 1216 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 USP20Q9Y2K6 914 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 RWDD3Q9Y3V2 267 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 SIP14410 1827 aa16.35■□□□□ 0.21
GARNL3-204ENST00000429629 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ANKRD63C9JTQ0 380 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ADRB2P07550 413 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 CLTAP09496 248 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ADSSP30520 456 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 NOMO2Q5JPE7 1267 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 CLLU1OSQ5K130 101 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ZNF658Q5TYW1 1059 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-204ENST00000429629 SLC39A4Q6P5W5 647 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ALKAL1Q6UXT8 129 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-204ENST00000429629 FIBCD1Q8N539 461 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ZBTB45Q96K62 511 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-204ENST00000429629 ACAP3Q96P50 834 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
GARNL3-204ENST00000429629 SLC28A3Q9HAS3 691 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 TTC3P53804 2025 aa16.34■□□□□ 0.21
GARNL3-204ENST00000429629 PDXKO00764 312 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 TGFB1I1O43294 461 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 FAM189A1O60320 539 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 RB1P06400 928 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 FGFR1P11362 822 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 RABGGTBP53611 331 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 YARSP54577 528 aaKnown RBP16.33■□□□□ 0.2
GARNL3-204ENST00000429629 BTG3Q14201 252 aaPredicted RBP16.33■□□□□ 0.2
GARNL3-204ENST00000429629 NFIL3Q16649 462 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 FAM117BQ6P1L5 589 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 FOXR2Q6PJQ5 311 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 TMCO2Q7Z6W1 182 aaPredicted RBP16.33■□□□□ 0.2
GARNL3-204ENST00000429629 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 CD302Q8IX05 232 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 LRRC43Q8N309 656 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 URGCPQ8TCY9 931 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 PLVAPQ9BX97 442 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 KIAA1586Q9HCI6 787 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
GARNL3-204ENST00000429629 YBX2Q9Y2T7 364 aaKnown RBP16.33■□□□□ 0.2
GARNL3-204ENST00000429629 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 LINC01553A4QN01 128 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 KCNE1P15382 129 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 PBX2P40425 430 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 ERVK-21P61565 698 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 TAP1Q03518 808 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 ZBTB33Q86T24 672 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
GARNL3-204ENST00000429629 GPT2Q8TD30 523 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms