RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SCP2P22307 547 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 KCNA1Q09470 495 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CAMK4Q16566 473 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 DCAF4L1Q3SXM0 396 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 SEZ6Q53EL9 994 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ISM2Q6H9L7 571 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CNNM4Q6P4Q7 775 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 MPZL3Q6UWV2 235 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CLEC17AQ6ZS10 378 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ARNTL2Q8WYA1 636 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 FIZ1Q96SL8 496 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 TRAIPQ9BWF2 469 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 RSAD1Q9HA92 442 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ANKRD63C9JTQ0 380 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 TOM1L1O75674 476 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 POMCP01189 267 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ATF7P17544 494 aaPredicted RBP15.94■□□□□ 0.14
SGCE-204ENST00000428696 HTRA4P83105 476 aaPredicted RBP15.94■□□□□ 0.14
SGCE-204ENST00000428696 DPYDQ12882 1025 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CLLU1OSQ5K130 101 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ZNF697Q5TEC3 545 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ZPBP2Q6X784 338 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 MRPL10Q7Z7H8 261 aaKnown RBP15.94■□□□□ 0.14
SGCE-204ENST00000428696 ZNF598Q86UK7 904 aaKnown RBP15.94■□□□□ 0.14
SGCE-204ENST00000428696 POMGNT1Q8WZA1 660 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 FAM212AQ96EL1 285 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 GAD1Q99259 594 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
SGCE-204ENST00000428696 TMEM117Q9H0C3 514 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 CDT1Q9H211 546 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ZNF576Q9H609 170 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 UBN1Q9NPG3 1134 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 MAPK8IP1Q9UQF2 711 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 LINC01553A4QN01 128 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 TISP43B9A030 160 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 KLRC4O43908 158 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 OFD1O75665 1012 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 ARHGEF15O94989 841 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 MCF2P10911 925 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 MLH1P40692 756 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 FXR1P51114 621 aaKnown RBP eCLIP15.93■□□□□ 0.14
SGCE-204ENST00000428696 YARSP54577 528 aaKnown RBP15.93■□□□□ 0.14
SGCE-204ENST00000428696 ALCAMQ13740 583 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 NOMO2Q5JPE7 1267 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 AGMOQ6ZNB7 445 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 Q7L0L9 218 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 MAP4K3Q8IVH8 894 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 CRIPAKQ8N1N5 446 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 HVCN1Q96D96 273 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 ZFP42Q96MM3 310 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 TIGD1Q96MW7 591 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 CASD1Q96PB1 797 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 FAM193BQ96PV7 902 aaPredicted RBP15.93■□□□□ 0.14
SGCE-204ENST00000428696 RPS6KC1Q96S38 1066 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 MSTO1Q9BUK6 570 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 ST6GALNAC4Q9H4F1 302 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 TMEM206Q9H813 350 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 LMBRD1Q9NUN5 540 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 TYW1Q9NV66 732 aaKnown RBP15.93■□□□□ 0.14
SGCE-204ENST00000428696 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
SGCE-204ENST00000428696 MICAL3Q7RTP6 2002 aa15.93■□□□□ 0.14
SGCE-204ENST00000428696 ARL5CA6NH57 179 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 CTNNB1P35222 781 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 AFF1P51825 1210 aaKnown RBP15.92■□□□□ 0.14
SGCE-204ENST00000428696 TAP1Q03518 808 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 STK4Q13043 487 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 PSMD2Q13200 908 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.14
SGCE-204ENST00000428696 SPRED2Q7Z698 418 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 CMTR2Q8IYT2 770 aaKnown RBP15.92■□□□□ 0.14
SGCE-204ENST00000428696 CEP120Q8N960 986 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 ZNF689Q96CS4 500 aaPredicted RBP15.92■□□□□ 0.14
SGCE-204ENST00000428696 ACAP3Q96P50 834 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 TGS1Q96RS0 853 aaKnown RBP15.92■□□□□ 0.14
SGCE-204ENST00000428696 C17orf80Q9BSJ5 609 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 PCIF1Q9H4Z3 704 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 HCSTQ9UBK5 93 aa15.92■□□□□ 0.14
SGCE-204ENST00000428696 MYH11P35749 1972 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 BIN1O00499 593 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 RECQL4O94761 1208 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 CSPG5O95196 566 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 TMEM192Q8IY95 271 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 DEFB123Q8N688 67 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 SEMA6BQ9H3T3 888 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 PTPRHQ9HD43 1115 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 RMND1Q9NWS8 449 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 GIT1Q9Y2X7 761 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 PCDHA5Q9Y5H7 936 aa15.91■□□□□ 0.14
SGCE-204ENST00000428696 RFXAPO00287 272 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 PPP1R37O75864 691 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 ACOT2P49753 483 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 SCNN1GP51170 649 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 MCL1Q07820 350 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 ARMCX5Q6P1M9 558 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 LRRC55Q6ZSA7 311 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 LRRC43Q8N309 656 aa15.9■□□□□ 0.14
SGCE-204ENST00000428696 ZNF507Q8TCN5 953 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms