RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 KRT79Q5XKE5 535 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 RPGRIP1Q96KN7 1286 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 PHF7Q9BWX1 381 aaPredicted RBP20.33■□□□□ 0.85
PSPC1-202ENST00000427943 CCDC113Q9H0I3 377 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 IRAK3Q9Y616 596 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 STK24Q9Y6E0 443 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 LOC730098B7Z3J9 87 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 N4BP3O15049 544 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 SP100P23497 879 aaPredicted RBP20.32■□□□□ 0.84
PSPC1-202ENST00000427943 ATP2C1P98194 919 aaPredicted RBP20.32■□□□□ 0.84
PSPC1-202ENST00000427943 GIT2Q14161 759 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 KCNK18Q7Z418 384 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 IFT74Q96LB3 600 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 RPS6KC1Q96S38 1066 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
PSPC1-202ENST00000427943 TRIOO75962 3097 aa20.32■□□□□ 0.84
PSPC1-202ENST00000427943 C2CD2LO14523 706 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 HOXB8P17481 243 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-202ENST00000427943 ZRSR1Q15695 479 aaKnown RBP20.31■□□□□ 0.84
PSPC1-202ENST00000427943 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 EEF1DP3Q658K8 133 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 GSTCDQ8NEC7 633 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 KIFAP3Q92845 792 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 HERC2P3Q9BVR0 1158 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 CACNG4Q9UBN1 327 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-202ENST00000427943 MTCL1Q9Y4B5 1905 aaKnown RBP20.31■□□□□ 0.84
PSPC1-202ENST00000427943 CITO14578 2027 aa20.31■□□□□ 0.84
PSPC1-202ENST00000427943 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 SOD2P04179 222 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 WEE2P0C1S8 567 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 GRIK3Q13003 919 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 RARS2Q5T160 578 aaKnown RBP20.3■□□□□ 0.84
PSPC1-202ENST00000427943 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 TAS1R1Q7RTX1 841 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 C12orf76Q8N812 135 aaPredicted RBP20.3■□□□□ 0.84
PSPC1-202ENST00000427943 SLC22A17Q8WUG5 538 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 RABGGTAQ92696 567 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 RUSC1Q9BVN2 902 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 SNTG2Q9NY99 539 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 DNM3Q9UQ16 869 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 ZMYM2Q9UBW7 1377 aa20.3■□□□□ 0.84
PSPC1-202ENST00000427943 VWA8A3KMH1 1905 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 ACKR2O00590 384 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 HIP1RO75146 1068 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 URODP06132 367 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 CNPP09543 421 aaKnown RBP20.29■□□□□ 0.84
PSPC1-202ENST00000427943 HERC4Q5GLZ8 1057 aaPredicted RBP20.29■□□□□ 0.84
PSPC1-202ENST00000427943 LARP1BQ659C4 914 aaKnown RBP20.29■□□□□ 0.84
PSPC1-202ENST00000427943 DAW1Q8N136 415 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 FEZF2Q8TBJ5 459 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 KLHL5Q96PQ7 755 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 PLIN2Q99541 437 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 ADPGKQ9BRR6 497 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 CXCL16Q9H2A7 254 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 MRPL17Q9NRX2 175 aaKnown RBP20.29■□□□□ 0.84
PSPC1-202ENST00000427943 DZANK1Q9NVP4 752 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 STK39Q9UEW8 545 aa20.29■□□□□ 0.84
PSPC1-202ENST00000427943 PDCD11Q14690 1871 aaKnown RBP20.28■□□□□ 0.84
PSPC1-202ENST00000427943 TECTAO75443 2155 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 PRR33A8MZF0 331 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 NR1I2O75469 434 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 RECQL4O94761 1208 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 KLRC2P26717 231 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 PEX3P56589 373 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 CES5AQ6NT32 575 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 RINT1Q6NUQ1 792 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
PSPC1-202ENST00000427943 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 EMILIN2Q9BXX0 1053 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 ADAM7Q9H2U9 754 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 POMKQ9H5K3 350 aa20.28■□□□□ 0.84
PSPC1-202ENST00000427943 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 SPDYE4A6NLX3 237 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 CCDC169A6NNP5 214 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 PTGESO14684 152 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 LILRB3O75022 631 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 GLUD2P49448 558 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 CLCN4P51793 760 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 EFNA5P52803 228 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 ITIH3Q06033 890 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 MAPK7Q13164 816 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 ATF7IP2Q5U623 682 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 CABP7Q86V35 215 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 B3GALT6Q96L58 329 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 PAAF1Q9BRP4 392 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 COLEC11Q9BWP8 271 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 TSHZ2Q9NRE2 1034 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 GDAQ9Y2T3 454 aa20.27■□□□□ 0.84
PSPC1-202ENST00000427943 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 CASTOR2A6NHX0 329 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 K7ERI5 159 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 EFEMP2O95967 443 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 NPTX2P47972 431 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 RAD51AP2Q09MP3 1159 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 DCAF4L1Q3SXM0 396 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 HYIQ5T013 277 aa20.26■□□□□ 0.83
PSPC1-202ENST00000427943 FUT10Q6P4F1 479 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms