RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TBCAO75347 108 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 PALMO75781 387 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 RHOBTB3O94955 611 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZBED1O96006 694 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 KRT6AP02538 564 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 KRT6BP04259 564 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CALM1P0DP23 149 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CALM2P0DP24 149 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CALM3P0DP25 149 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 GNAT2P19087 354 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SSTR3P32745 418 aaPredicted RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTKP33981 857 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 EIF4A3P38919 411 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 AFMP43652 599 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 IFNAR2P48551 515 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CHN2P52757 468 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 PTENP60484 403 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAP3K10Q02779 954 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 RASSF7Q02833 373 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 TBL3Q12788 808 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 EIF2B5Q13144 721 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ITGA7Q13683 1181 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 HNRNPDQ14103 355 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SPARCL1Q14515 664 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 KRT81Q14533 505 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 LPIN1Q14693 890 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 TNIP1Q15025 636 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SLC18A3Q16572 532 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF423Q2M1K9 1284 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 P3H1Q32P28 736 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAAH2Q6GMR7 532 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 C4orf50Q6ZRC1 276 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 PRR23CQ6ZRP0 262 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 STOX1Q6ZVD7 989 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CATIPQ7Z7H3 387 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 C11orf74Q86VG3 221 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ERI1Q8IV48 349 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 BBS5Q8N3I7 341 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 RASGEF1CQ8N431 466 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 KIF2BQ8N4N8 673 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CRACR2BQ8N4Y2 399 aaPredicted RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 FITM2Q8N6M3 262 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDHD1Q8NEL9 900 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 MORC4Q8TE76 937 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 PYROXD1Q8WU10 500 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ANKS1AQ92625 1134 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SYMPKQ92797 1274 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 P2RX5Q93086 422 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 BORCS5Q969J3 196 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ERP27Q96DN0 273 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 COX4I2Q96KJ9 171 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CNOT6LQ96LI5 555 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC138Q96M89 665 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SETDB2Q96T68 719 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ECSITQ9BQ95 431 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ERP44Q9BS26 406 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 LRRC2Q9BYS8 371 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 NT5C3AQ9H0P0 336 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 AZI2Q9H6S1 392 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CD209Q9NNX6 404 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 PFDN4Q9NQP4 134 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 TOR4AQ9NXH8 423 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 UBAP1Q9NZ09 502 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CNOT8Q9UFF9 292 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 COL22A1Q8NFW1 1626 aaPredicted RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SLIT3O75094 1523 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 METP08581 1390 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 ALKQ9UM73 1620 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 A0A1B0GVG6 124 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 A0A1W2PRG0 241 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 TLDC2A0PJX2 215 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 TMEM120BA0PK00 339 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 DYTNA2CJ06 578 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 PI4KAP2A4QPH2 592 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC160A6NGH7 325 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX3XO00571 662 aaKnown RBP eCLIP5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 C2CD2LO14523 706 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 MCF2LO15068 1137 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 DAPK3O43293 454 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 PEX1O43933 1283 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 NOL3O60936 208 aaKnown RBP5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 STAM2O75886 525 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 HAUS5O94927 633 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 CLPTM1O96005 669 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 PDGFRBP09619 1106 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 ALOX5P09917 674 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 CYP2C9P11712 490 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 KCNA2P16389 499 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 PTPN2P17706 415 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 CALML3P27482 149 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 ECHS1P30084 290 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 CXCR5P32302 372 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 TCF7P36402 384 aaPredicted RBP5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 HALP42357 657 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 TUBP50607 506 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 NR1H2P55055 460 aa5.97□□□□□ -1.45
VTI1BP4-201ENST00000427516 RTP1P59025 263 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms