RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 CELF2O95319 508 aaKnown RBP23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 PRLRP16471 622 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 GTF2H1P32780 548 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 ACOT2P49753 483 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 SV2AQ7L0J3 742 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 LRRC71Q8N4P6 559 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 PSPC1Q8WXF1 523 aaKnown RBP23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 TMEM134Q9H6X4 195 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 RRAGCQ9HB90 399 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 KIAA1586Q9HCI6 787 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 TRPC6Q9Y210 931 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 PPME1Q9Y570 386 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 TCP1P17987 556 aaKnown RBP23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 USP8P40818 1118 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 NOP2P46087 812 aaKnown RBP23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 GPC3P51654 580 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 GJC2Q5T442 439 aaPredicted RBP23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 CREG2Q8IUH2 290 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 SLC20A1Q8WUM9 679 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 KREMEN1Q96MU8 473 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 RAB20Q9NX57 234 aa23.53■■□□□ 1.36
CNEP1R1-202ENST00000427478 TNFAIP3P21580 790 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 MKRN4PQ13434 485 aaPredicted RBP23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 LMBRD2Q68DH5 695 aaPredicted RBP23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 TMCO3Q6UWJ1 677 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 C2orf69Q8N8R5 385 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 MSANTD4Q8NCY6 345 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 TRAPPC12Q8WVT3 735 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 ELMO3Q96BJ8 720 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 PNKPQ96T60 521 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 SMARCAD1Q9H4L7 1026 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 DIS3Q9Y2L1 958 aaKnown RBP23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 IVNS1ABPQ9Y6Y0 642 aa23.52■■□□□ 1.36
CNEP1R1-202ENST00000427478 FAM170AA1A519 330 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 GALCP54803 685 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 WNT7BP56706 349 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 IER5Q5VY09 327 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 SLFN12LQ6IEE8 588 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 TCP11Q8WWU5 503 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 NT5C1BQ96P26 610 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 AGPAT1Q99943 283 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 MSTO1Q9BUK6 570 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 RNF216Q9NWF9 866 aaPredicted RBP23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 MORF4L1Q9UBU8 362 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 TSKSQ9UJT2 592 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 INTUQ9ULD6 942 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 KIAA0391O15091 583 aaKnown RBP23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 DNA2P51530 1060 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 ENPEPQ07075 957 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 PSMD6Q15008 389 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZBTB41Q5SVQ8 909 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 CRELD2Q6UXH1 353 aaPredicted RBP23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 PALB2Q86YC2 1186 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 RPGRIP1Q96KN7 1286 aa23.51■■□□□ 1.35
CNEP1R1-202ENST00000427478 SPDYE4A6NLX3 237 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 SEC31AO94979 1220 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 SRGAP2CP0DJJ0 459 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 HARSP12081 509 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 MFAP3P55082 362 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 ARHGAP1Q07960 439 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 LAMTOR4Q0VGL1 99 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 SPRYD7Q5W111 196 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 TAPT1Q6NXT6 567 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 HELQQ8TDG4 1101 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZNF516Q92618 1163 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 FNBP1Q96RU3 617 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 PACSIN2Q9UNF0 486 aaPredicted RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 GAS2O43903 313 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 SLC26A2P50443 739 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 C2orf54Q08AI8 447 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 IFI16Q16666 785 aaKnown RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 MEI1Q5TIA1 1274 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 PI4K2AQ9BTU6 479 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 TAS2R14Q9NYV8 317 aa23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 RBAKQ9NYW8 714 aaPredicted RBP23.5■■□□□ 1.35
CNEP1R1-202ENST00000427478 IGKV6-21A0A0C4DH24 114 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 TTLL13PA6NNM8 815 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 TNNI1P19237 187 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 FAM71AQ8IYT1 594 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 RNF149Q8NC42 400 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 PDE11AQ9HCR9 933 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 VTA1Q9NP79 307 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 SMARCAL1Q9NZC9 954 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 EHD2Q9NZN4 543 aa23.49■■□□□ 1.35
CNEP1R1-202ENST00000427478 A0A0B4J269 797 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 ABCB4P21439 1286 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 MXD4Q14582 209 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CCDC181Q5TID7 509 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CC2D1AQ6P1N0 951 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 C15orf39Q6ZRI6 1047 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 GPR142Q7Z601 462 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 ABRAQ8N0Z2 381 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 SHC3Q92529 594 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 ZBTB10Q96DT7 871 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 PTPN18Q99952 460 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 GOLPH3Q9H4A6 298 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 PTPRJQ12913 1337 aa23.48■■□□□ 1.35
CNEP1R1-202ENST00000427478 ADGRA2Q96PE1 1338 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms