RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 ERVFC1P60507 584 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CDC42EP1Q00587 391 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CLUL1Q15846 466 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 TWF2Q6IBS0 349 aaKnown RBP7.43□□□□□ -1.22
DDX39B-207ENST00000427214 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CATSPER4Q7RTX7 472 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 FERMT3Q86UX7 667 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CATSPER3Q86XQ3 398 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 NOSTRINQ8IVI9 506 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 C4orf32Q8N8J7 132 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 FAM184AQ8NB25 1140 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 RNF149Q8NC42 400 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 PSPC1Q8WXF1 523 aaKnown RBP7.43□□□□□ -1.22
DDX39B-207ENST00000427214 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 TRAIPQ9BWF2 469 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 IGFLR1Q9H665 355 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CHST12Q9NRB3 414 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 ANKEF1Q9NU02 776 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 AGPAT5Q9NUQ2 364 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 CLDND1Q9NY35 253 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 DACT1Q9NYF0 836 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 PIN4Q9Y237 131 aaKnown RBP7.43□□□□□ -1.22
DDX39B-207ENST00000427214 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 PCDHB12Q9Y5F1 795 aa7.43□□□□□ -1.22
DDX39B-207ENST00000427214 FSCN2O14926 492 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 B4GALT3O60512 393 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 TBX10O75333 385 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 EOMESO95936 686 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 OR52Z1P0C646 297 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 LAG3P18627 525 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 GLRA2P23416 452 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 U2AF2P26368 475 aaKnown RBP eCLIP7.42□□□□□ -1.225e-14■■■■□ 22.7
DDX39B-207ENST00000427214 HOXA11P31270 313 aaPredicted RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 ARL2P36404 184 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 NRIP1P48552 1158 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 PTENP60484 403 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 RBM10P98175 930 aaKnown RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 ADAM15Q13444 863 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 CAPSQ13938 189 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 ECM1Q16610 540 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 KCNT2Q6UVM3 1135 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 MAEAQ7L5Y9 396 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 SRGAP1Q7Z6B7 1085 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 RBM23Q86U06 439 aaKnown RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 EXOC8Q8IYI6 725 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 THNSL1Q8IYQ7 743 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 CCDC116Q8IYX3 515 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 LRRC43Q8N309 656 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 VN1R2Q8NFZ6 395 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 TCP11Q8WWU5 503 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 TBC1D32Q96NH3 1257 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 INO80BQ9C086 356 aaPredicted RBP7.42□□□□□ -1.22
DDX39B-207ENST00000427214 GPRC5CQ9NQ84 441 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 FAM105AQ9NUU6 356 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 FKBPLQ9UIM3 349 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 PCDHB6Q9Y5E3 794 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
DDX39B-207ENST00000427214 PLXNA4Q9HCM2 1894 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 NT5C1B-RDH14C9J2C7 533 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 PER2O15055 1255 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ASAP2O43150 1006 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 GAS2O43903 313 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 TSPAN1O60635 241 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ZNF623O75123 536 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 OFD1O75665 1012 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 GLP2RO95838 553 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 TRAPPC10P48553 1259 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 BCAR1P56945 870 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 UBE3AQ05086 875 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 MBTD1Q05BQ5 628 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ORC2Q13416 577 aaPredicted RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 IL17AQ16552 155 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 PLPP4Q5VZY2 271 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 AGMOQ6ZNB7 445 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 MRPL10Q7Z7H8 261 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 TMEM173Q86WV6 379 aaPredicted RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 FAM178BQ8IXR5 827 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 SLC39A11Q8N1S5 342 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ZSCAN1Q8NBB4 408 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 MRPS27Q92552 414 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 CPB2Q96IY4 423 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 MSLNLQ96KJ4 702 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ZNF558Q96NG5 402 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 POLR3CQ9BUI4 534 aaPredicted RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 EIF2AQ9BY44 585 aaKnown RBP7.41□□□□□ -1.22
DDX39B-207ENST00000427214 FAM117AQ9C073 453 aa7.41□□□□□ -1.22
DDX39B-207ENST00000427214 POLR3FQ9H1D9 316 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms