RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 ADAM15Q13444 863 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 ATF7IP2Q5U623 682 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 EEF1DP3Q658K8 133 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 VPS52Q8N1B4 723 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-205ENST00000426678 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
NCKIPSD-205ENST00000426678 CCSER1Q9C0I3 900 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 STK39Q9UEW8 545 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 FAN1Q9Y2M0 1017 aa16■□□□□ 0.15
NCKIPSD-205ENST00000426678 SRPRBQ9Y5M8 271 aaKnown RBP16■□□□□ 0.15
NCKIPSD-205ENST00000426678 PER2O15055 1255 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 SLC16A4O15374 487 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 TBX10O75333 385 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 NR1I2O75469 434 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 EDN1P05305 212 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 SRGAP2BP0DMP2 458 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 OR1G1P47890 313 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 GRIK3Q13003 919 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 STRN3Q13033 797 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 STK38Q15208 465 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 DUSP6Q16828 381 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 SPECC1Q5M775 1068 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 DDX53Q86TM3 631 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 TMEM87AQ8NBN3 555 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 BCL7CQ8WUZ0 217 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 RAD54LQ92698 747 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 EPSTI1Q96J88 318 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 NECAB3Q96P71 396 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 BLOC1S4Q9NUP1 217 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 KLK14Q9P0G3 267 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 LARSQ9P2J5 1176 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 ODF2LQ9ULJ1 636 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 PRG3Q9Y2Y8 225 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 TTC28Q96AY4 2481 aa15.99■□□□□ 0.15
NCKIPSD-205ENST00000426678 NPHP3-ACAD11A0A0J9YXS1 232 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 HIDE1A8MVS5 230 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 H0YCG3 227 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 TNFRSF10AO00220 468 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 NRP1O14786 923 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 RECQL4O94761 1208 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 FAM13AO94988 1023 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 DLX2Q07687 328 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 DSC1Q08554 894 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 MCM6Q14566 821 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 SLC39A14Q15043 492 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 CLUL1Q15846 466 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZNF568Q3ZCX4 644 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 COLGALT2Q8IYK4 626 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 KRI1Q8N9T8 703 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 REEP2Q9BRK0 252 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZBP1Q9H171 429 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 SNTG2Q9NY99 539 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 STK17AQ9UEE5 414 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 CD207Q9UJ71 328 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 TNFSF13BQ9Y275 285 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 XIRP2A4UGR9 3374 aa15.98■□□□□ 0.15
NCKIPSD-205ENST00000426678 GRXCR2A6NFK2 248 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 CXCL14O95715 111 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 IL9P15248 144 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 NASPP49321 788 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 GIT2Q14161 759 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 USP49Q70CQ1 688 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 TAS1R3Q7RTX0 852 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 MRPL43Q8N983 215 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 GSTCDQ8NEC7 633 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 ACO2Q99798 780 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 NTPCRQ9BSD7 190 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 TCHPQ9BT92 498 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 MIOSQ9NXC5 875 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 BARX2Q9UMQ3 279 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
NCKIPSD-205ENST00000426678 C2orf71A6NGG8 1288 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 GLP2RO95838 553 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 ZSCAN22P10073 491 aaPredicted RBP15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 CTSAP10619 480 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 DDIT3P35638 169 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 SMAD4Q13485 552 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 RRAGBQ5VZM2 374 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 LLGL2Q6P1M3 1020 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 MYCT1Q8N699 235 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 TMEM161BQ8NDZ6 487 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 AUTS2Q8WXX7 1259 aa15.96■□□□□ 0.15
NCKIPSD-205ENST00000426678 MSLNLQ96KJ4 702 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms