RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SPRED3Q2MJR0 410 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 EAPPQ56P03 285 aaPredicted RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 STXBP4Q6ZWJ1 553 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 CCDC13Q8IYE1 715 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 AGPAT3Q9NRZ7 376 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 OTOFQ9HC10 1997 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 F8VZ95 297 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 PDXKO00764 312 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 CREB1P16220 341 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 CYP3A7P24462 503 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 MAP2K2P36507 400 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 PMS2P54278 862 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
USP42-203ENST00000426246 JAMLQ86YT9 394 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 NEK9Q8TD19 979 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 NUP85Q9BW27 656 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 ALG13Q9NP73 1137 aaKnown RBP14.37□□□□□ -0.11
USP42-203ENST00000426246 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 PIK3CDO00329 1044 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 HNRNPDLO14979 420 aaKnown RBP14.37□□□□□ -0.11
USP42-203ENST00000426246 SPAG7O75391 227 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 YBX3P16989 372 aaKnown RBP eCLIP14.37□□□□□ -0.116e-9■□□□□ 9.5
USP42-203ENST00000426246 CD58P19256 250 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 KYNUQ16719 465 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 FRMD5Q7Z6J6 570 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 SRRM1Q8IYB3 904 aaKnown RBP14.37□□□□□ -0.11
USP42-203ENST00000426246 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 SEC16BQ96JE7 1060 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 RAB17Q9H0T7 212 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 UNC45AQ9H3U1 944 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 AIPL1Q9NZN9 384 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 LARSQ9P2J5 1176 aaKnown RBP14.37□□□□□ -0.11
USP42-203ENST00000426246 PCDHGC5Q9Y5F6 944 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 CENPFP49454 3210 aa14.37□□□□□ -0.11
USP42-203ENST00000426246 PJA2O43164 708 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 GLE1Q53GS7 698 aaKnown RBP14.36□□□□□ -0.11
USP42-203ENST00000426246 SGO2Q562F6 1265 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 ARHGAP27Q6ZUM4 889 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 ZNF341Q9BYN7 854 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
USP42-203ENST00000426246 NFIBO00712 420 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 CTNNA2P26232 953 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 LENG9Q96B70 501 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 GLT8D2Q9H1C3 349 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 COG5Q9UP83 839 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 BZW2Q9Y6E2 419 aaKnown RBP14.36□□□□□ -0.11
USP42-203ENST00000426246 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.36□□□□□ -0.11
USP42-203ENST00000426246 ZNF536O15090 1300 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 CDR2LQ86X02 465 aaPredicted RBP14.36□□□□□ -0.11
USP42-203ENST00000426246 IQCDQ96DY2 449 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 SYT17Q9BSW7 474 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 TEKT3Q9BXF9 490 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 C10orf88Q9H8K7 445 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 TMBIM4Q9HC24 238 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 APEX2Q9UBZ4 518 aa14.36□□□□□ -0.11
USP42-203ENST00000426246 RASGRF2O14827 1237 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 EYA4O95677 639 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PYGMP11217 842 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PRLRP16471 622 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PPATQ06203 517 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 CEP55Q53EZ4 464 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
USP42-203ENST00000426246 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 KCNMB3Q9NPA1 279 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 COL11A1P12107 1806 aaPredicted RBP14.35□□□□□ -0.11
USP42-203ENST00000426246 THAP12O43422 761 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PEX10O60683 326 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 ACOT2P49753 483 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 VAMP7P51809 220 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 AP3B2Q13367 1082 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 LRRC34Q8IZ02 419 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 HVCN1Q96D96 273 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 C11orf70Q9BRQ4 267 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 RNF14Q9UBS8 474 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 PTPRFP10586 1907 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 CCDC172P0C7W6 258 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 MYBL1P10243 752 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 ITGB3BPQ13352 177 aaPredicted RBP14.35□□□□□ -0.11
USP42-203ENST00000426246 EDRF1Q3B7T1 1238 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 LDHDQ86WU2 507 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 ANKS4BQ8N8V4 417 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 CAVIN3Q969G5 261 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 NACC1Q96RE7 527 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 SH3GL2Q99962 352 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
USP42-203ENST00000426246 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
USP42-203ENST00000426246 PIK3R2O00459 728 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms