RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 NT5C3AQ9H0P0 336 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 MARCH5Q9NX47 278 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
SMARCAL1-205ENST00000425815 NPHP3-ACAD11A0A0J9YXS1 232 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 CARNS1A5YM72 827 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 F8W810 466 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 N4BP3O15049 544 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 CLASP2O75122 1294 aaKnown RBP20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 SMAD4Q13485 552 aaKnown RBP20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 TAS1R1Q7RTX1 841 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 SMRP1Q8NCR6 262 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 FAM193BQ96PV7 902 aaPredicted RBP20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 TMEM134Q9H6X4 195 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 PTPRHQ9HD43 1115 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 BLOC1S4Q9NUP1 217 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 SNTG2Q9NY99 539 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 ARHGAP28Q9P2N2 729 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 PARP2Q9UGN5 583 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 IRAK3Q9Y616 596 aa20.21■□□□□ 0.83
SMARCAL1-205ENST00000425815 BDP1A6H8Y1 2624 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 CCDC169A6NNP5 214 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 K7ERI5 159 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 SLC26A4O43511 780 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 LILRB3O75022 631 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 LONP1P36776 959 aaKnown RBP20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 RAD51AP2Q09MP3 1159 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 GJD3Q8N144 294 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 TIPINQ9BVW5 301 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 S1PR5Q9H228 398 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 C17orf75Q9HAS0 396 aa20.2■□□□□ 0.82
SMARCAL1-205ENST00000425815 C19orf67A6NJJ6 358 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 PTGESO14684 152 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 UBA7P41226 1012 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 OR1G1P47890 313 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 ZP2Q05996 745 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 KARSQ15046 597 aaKnown RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 LLGL2Q6P1M3 1020 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 SYCE2Q6PIF2 218 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 HACE1Q8IYU2 909 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 RNF168Q8IYW5 571 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 EPSTI1Q96J88 318 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 ACO2Q99798 780 aaKnown RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 KMT5AQ9NQR1 393 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 FBXO2Q9UK22 296 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 TNFSF13BQ9Y275 285 aa20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 PRG3Q9Y2Y8 225 aaPredicted RBP20.19■□□□□ 0.82
SMARCAL1-205ENST00000425815 SLC16A4O15374 487 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 STX6O43752 255 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 PLS3P13797 630 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 CACNB1Q02641 598 aaPredicted RBP20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 DMP1Q13316 513 aaPredicted RBP20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 NAB2Q15742 525 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 ANKRD54Q6NXT1 300 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 ADHFE1Q8IWW8 467 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 SPIRE2Q8WWL2 714 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 CDK5RAP3Q96JB5 506 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 CCSER1Q9C0I3 900 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 EPHX3Q9H6B9 360 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 KCND2Q9NZV8 630 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 CACNG4Q9UBN1 327 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 PRKAG3Q9UGI9 489 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 FAM50BQ9Y247 325 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 HCFC2Q9Y5Z7 792 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 ZMYM2Q9UBW7 1377 aa20.18■□□□□ 0.82
SMARCAL1-205ENST00000425815 ABLIM1O14639 778 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 RECQL4O94761 1208 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 PLCG1P19174 1290 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 MCM6Q14566 821 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 TMEM161BQ8NDZ6 487 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 SLC22A17Q8WUG5 538 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 SUSD6Q92537 303 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 RABGGTAQ92696 567 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 CLIC6Q96NY7 704 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 USP28Q96RU2 1077 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 PAAF1Q9BRP4 392 aa20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 TARS2Q9BW92 718 aaKnown RBP20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 USP15Q9Y4E8 981 aaPredicted RBP20.17■□□□□ 0.82
SMARCAL1-205ENST00000425815 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 FSD2A1L4K1 749 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 PROZP22891 400 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 GRIK3Q13003 919 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 TMEM132AQ24JP5 1023 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 DCAF4L1Q3SXM0 396 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 RAD54LQ92698 747 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 ADPGKQ9BRR6 497 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 GDAQ9Y2T3 454 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 PHLPP2Q6ZVD8 1323 aa20.16■□□□□ 0.82
SMARCAL1-205ENST00000425815 C5orf42Q9H799 3197 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms