RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 IKBKEQ14164 716 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 CDCA2Q69YH5 1023 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 BAG1Q99933 345 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 C17orf75Q9HAS0 396 aa17.07■□□□□ 0.32
SHOX2-202ENST00000425436 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
SHOX2-202ENST00000425436 TRIM49BA6NDI0 452 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TEX33O43247 280 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 ZSCAN12O43309 604 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 MGEA5O60502 916 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 ACTN1P12814 892 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 NMT1P30419 496 aaKnown RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 SMTNP53814 917 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 HERC4Q5GLZ8 1057 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 PSRC1Q6PGN9 363 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 NUP58Q9BVL2 599 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 NFKBIZQ9BYH8 718 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 VPS16Q9H269 839 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 GOLGA6L9A6NEM1 432 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TTLL13PA6NNM8 815 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 K7ERI5 159 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 ENPP3O14638 875 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 B4GALT5O43286 388 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 GNA14O95837 355 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 GAP43P17677 238 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 IBSPP21815 317 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 BMP8BP34820 402 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 UBXN1Q04323 297 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 CREBRFQ8IUR6 639 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TC2NQ8N9U0 490 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TMEM161BQ8NDZ6 487 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 SPIRE2Q8WWL2 714 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 APBB2Q92870 758 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 CPB2Q96IY4 423 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 TAB2Q9NYJ8 693 aa17.06■□□□□ 0.32
SHOX2-202ENST00000425436 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
SHOX2-202ENST00000425436 MICAL3Q7RTP6 2002 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 DENND3A2RUS2 1198 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 ERLIN2O94905 339 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 EDN1P05305 212 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 NCKAP1LP55160 1127 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 AMHR2Q16671 573 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 ZC2HC1CQ53FD0 456 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 TAS1R3Q7RTX0 852 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 HAUS6Q7Z4H7 955 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 TMCO2Q7Z6W1 182 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 LINC01599Q8WXQ3 324 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 HERVK_113Q902F9 699 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 FIZ1Q96SL8 496 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 ADAM2Q99965 735 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 CCDC113Q9H0I3 377 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 FZD8Q9H461 694 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 MRPL44Q9H9J2 332 aaKnown RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
SHOX2-202ENST00000425436 PIN4Q9Y237 131 aaKnown RBP17.05■□□□□ 0.32
SHOX2-202ENST00000425436 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 K7ENM7 598 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 TSPAN1O60635 241 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 PRKCBP05771 671 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 MAPTP10636 758 aaKnown RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 EFNA5P52803 228 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 MAPK6Q16659 721 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 PRPF38BQ5VTL8 546 aaKnown RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 PRO3102Q9H379 93 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 AGPAT5Q9NUQ2 364 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
SHOX2-202ENST00000425436 KCNG1Q9UIX4 513 aa17.04■□□□□ 0.32
SHOX2-202ENST00000425436 TNNT1P13805 278 aa17.03■□□□□ 0.32
SHOX2-202ENST00000425436 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
SHOX2-202ENST00000425436 ARF4P18085 180 aaPredicted RBP17.03■□□□□ 0.32
SHOX2-202ENST00000425436 WDR5P61964 334 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms