RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CA14Q9ULX7 337 aa17.38■□□□□ 0.37
RPUSD3-204ENST00000424438 GIT1Q9Y2X7 761 aa17.38■□□□□ 0.37
RPUSD3-204ENST00000424438 IPPQ9Y573 584 aa17.38■□□□□ 0.37
RPUSD3-204ENST00000424438 BAHCC1Q9P281 2608 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 C2CD2LO14523 706 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 SPTLC1O15269 473 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 ZMYND10O75800 440 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 HNRNPA1P09651 372 aaKnown RBP eCLIP17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 HOXA9P31269 272 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 OR1G1P47890 313 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 MXD4Q14582 209 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 USP41Q3LFD5 358 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 NOTUMQ6P988 496 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 TAS1R1Q7RTX1 841 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 FERMT3Q86UX7 667 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 GJA10Q969M2 543 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 SH2D3AQ9BRG2 576 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 SLC26A6Q9BXS9 759 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 VAV3Q9UKW4 847 aa17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-204ENST00000424438 PRR5-ARHGAP8B1AHC4 643 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 TBX3O15119 743 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 TGM5O43548 720 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 ERLIN2O94905 339 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 ATXN1P54253 815 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 NPEPPSP55786 919 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 PTENP60484 403 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 ARHGAP8P85298 464 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 PRKCQQ04759 706 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 NPY5RQ15761 445 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 HACE1Q8IYU2 909 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 CEP170P1Q96L14 293 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 GAD1Q99259 594 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 NFKBIZQ9BYH8 718 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 PIDD1Q9HB75 910 aa17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 DDX25Q9UHL0 483 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-204ENST00000424438 EML1O00423 815 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 TSPAN1O60635 241 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 LMNB2Q03252 620 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 NCBP1Q09161 790 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 VARS2Q5ST30 1063 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 PPP4R3AQ6IN85 833 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 FUT10Q6P4F1 479 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 RTL10Q7L3V2 364 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 MAML2Q8IZL2 1156 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 ADAM28Q9UKQ2 775 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 NUMBLQ9Y6R0 609 aa17.35■□□□□ 0.37
RPUSD3-204ENST00000424438 DEXIO95424 95 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 DCNP07585 359 aaKnown RBP17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 SRGAP2CP0DJJ0 459 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 HSPA4P34932 840 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 MLH1P40692 756 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 GRIK3Q13003 919 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 EMC2Q15006 297 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 EPHA7Q15375 998 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 MTSS1LQ765P7 747 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 GSTCDQ8NEC7 633 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 NELL1Q92832 810 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 TMEM143Q96AN5 459 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 JAKMIP1Q96N16 626 aaKnown RBP17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 FBXW11Q9UKB1 542 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 CDH7Q9ULB5 785 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 PCDHGA2Q9Y5H1 932 aa17.34■□□□□ 0.37
RPUSD3-204ENST00000424438 KANSL1LA0AUZ9 987 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 CDC45O75419 566 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 GLULP15104 373 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 FSHRP23945 695 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 PSMA5P28066 241 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 YWHABP31946 246 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 SCNN1GP51170 649 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 PFKPQ01813 784 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 AMHR2Q16671 573 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 GET4Q7L5D6 327 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 RTKNQ9BST9 563 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 EIF2AQ9BY44 585 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 GPR62Q9BZJ7 368 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 MIOSQ9NXC5 875 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 F5P12259 2224 aa17.33■□□□□ 0.36
RPUSD3-204ENST00000424438 SF3B1O75533 1304 aaKnown RBP eCLIP17.32■□□□□ 0.361e-6■■■■■ 66.8
RPUSD3-204ENST00000424438 SLC37A4O43826 429 aa17.32■□□□□ 0.36
RPUSD3-204ENST00000424438 LYPLA2O95372 231 aa17.32■□□□□ 0.36
RPUSD3-204ENST00000424438 CPA1P15085 419 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms