RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	LOXHD1	Q8IVV2	1947 aa		10.91	□□□□□ -0.66
POLR1A-204	ENST00000424089		A0A0U1RQJ8	604 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CTAGE15	A4D2H0	777 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	BACH1	O14867	736 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	ZNF263	O14978	683 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	ATG7	O95352	703 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	TIMP1	P01033	207 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CTAGE8	P0CG41	777 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	IGFBP4	P22692	258 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	STAT1	P42224	750 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	FMO5	P49326	533 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CASP4	P49662	377 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CYP27A1	Q02318	531 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	BFSP1	Q12934	665 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	DMP1	Q13316	513 aa	Predicted RBP	10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	RAPGEF1	Q13905	1077 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	KCTD2	Q14681	263 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	IFI16	Q16666	785 aa	Known RBP	10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	IQCE	Q6IPM2	695 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	ABHD15	Q6UXT9	468 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	ANKRD33	Q7Z3H0	272 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CTAGE6	Q86UF2	777 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CTAGE4	Q8IX94	777 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	XXYLT1	Q8NBI6	393 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	UBE2Q2	Q8WVN8	375 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	ATRIP	Q8WXE1	791 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CEP170P1	Q96L14	293 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	NECAB3	Q96P71	396 aa	Predicted RBP	10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	NOX5	Q96PH1	765 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	TINF2	Q9BSI4	451 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CRACR2A	Q9BSW2	395 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	STK33	Q9BYT3	514 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	LACRT	Q9GZZ8	138 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	MTIF3	Q9H2K0	278 aa	Known RBP	10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	GABBR1	Q9UBS5	961 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	MSRA	Q9UJ68	235 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	INTU	Q9ULD6	942 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	USP20	Q9Y2K6	914 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	DIS3	Q9Y2L1	958 aa	Known RBP	10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	CDH23	Q9H251	3354 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	PARP14	Q460N5	1801 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	MYO9B	Q13459	2157 aa		10.9	□□□□□ -0.66
POLR1A-204	ENST00000424089	MOXD2P	A6NHM9	499 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	KIAA0391	O15091	583 aa	Known RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	RGS20	O76081	388 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ABL1	P00519	1130 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	PLEK	P08567	350 aa	Predicted RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	SUPT20HL2	P0C7V6	817 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	SLC9A1	P19634	815 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	EDNRB	P24530	442 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	MCM3	P25205	808 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ACLY	P53396	1101 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	JAM2	P57087	298 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ACTR2	P61160	394 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ITIH3	Q06033	890 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAAP100	Q0VG06	881 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	NEDD9	Q14511	834 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	NAA30	Q147X3	362 aa	Predicted RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	UGCG	Q16739	394 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM102B	Q5T8I3	360 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	MFSD5	Q6N075	450 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	SWSAP1	Q6NVH7	229 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ANO5	Q75V66	913 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	IRF2BP2	Q7Z5L9	587 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	ALYREF	Q86V81	257 aa	Known RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	MAP4K3	Q8IVH8	894 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	EXOC8	Q8IYI6	725 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMEM199	Q8N511	208 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	CALR3	Q96L12	384 aa	Known RBP	10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	IFT74	Q96LB3	600 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	GLT1D1	Q96MS3	346 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.89	□□□□□ -0.67	4e-7	■■□□□ 11.6
POLR1A-204	ENST00000424089	PRDM12	Q9H4Q4	367 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	SIX2	Q9NPC8	291 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	GCNT4	Q9P109	453 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	RNF14	Q9UBS8	474 aa		10.89	□□□□□ -0.67
POLR1A-204	ENST00000424089	BDP1	A6H8Y1	2624 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	RCCD1	A6NED2	376 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	TLR3	O15455	904 aa	Known RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	STBD1	O95210	358 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	TCP1	P17987	556 aa	Known RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	GTF2H1	P32780	548 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	CYP2J2	P51589	502 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	ALDH5A1	P51649	535 aa	Predicted RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	VAMP7	P51809	220 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	PEX3	P56589	373 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	GFPT1	Q06210	699 aa	Predicted RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	BMS1	Q14692	1282 aa	Known RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	BRD3	Q15059	726 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	NAB2	Q15742	525 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	RAB30	Q15771	203 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	BRDT	Q58F21	947 aa	Predicted RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	UTP14C	Q5TAP6	766 aa	Known RBP	10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	SMYD5	Q6GMV2	418 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM133A	Q8N9E0	248 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	TMEM161B	Q8NDZ6	487 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	FAM81B	Q96LP2	452 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	LRFN3	Q9BTN0	628 aa		10.88	□□□□□ -0.67
POLR1A-204	ENST00000424089	NIFK	Q9BYG3	293 aa	Known RBP	10.88	□□□□□ -0.67

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