RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 VPS52Q8N1B4 723 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 MRPL43Q8N983 215 aaKnown RBP19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 AUTS2Q8WXX7 1259 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 USP28Q96RU2 1077 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 TMEM175Q9BSA9 504 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 NGRNQ9NPE2 291 aaKnown RBP19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 KLK14Q9P0G3 267 aa19.66■□□□□ 0.74
SBDSP1-202ENST00000423945 CCDC169A6NNP5 214 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 F8W810 466 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 MBTPS2O43462 519 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 EFEMP2O95967 443 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 SSBP05455 408 aaKnown RBP eCLIP19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 PLCG1P19174 1290 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 UBA7P41226 1012 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 NDUFV1P49821 464 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 PUS10Q3MIT2 529 aaKnown RBP19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 CDK5RAP3Q96JB5 506 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 DRC1Q96MC2 740 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 CDCA3Q99618 268 aaPredicted RBP19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 TIPINQ9BVW5 301 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 SNTG2Q9NY99 539 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 PARP2Q9UGN5 583 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 PHLPP2Q6ZVD8 1323 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 ZMYM2Q9UBW7 1377 aa19.65■□□□□ 0.74
SBDSP1-202ENST00000423945 CARNS1A5YM72 827 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 K7ERI5 159 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 ALDH2P05091 517 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 CEBPZQ03701 1054 aaKnown RBP19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 DMP1Q13316 513 aaPredicted RBP19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 SMC1AQ14683 1233 aaKnown RBP19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 EPSTI1Q96J88 318 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 FAM193BQ96PV7 902 aaPredicted RBP19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 NTPCRQ9BSD7 190 aaKnown RBP19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 CCSER1Q9C0I3 900 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 TMEM134Q9H6X4 195 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 KMT5AQ9NQR1 393 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 CD207Q9UJ71 328 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 FAN1Q9Y2M0 1017 aa19.64■□□□□ 0.73
SBDSP1-202ENST00000423945 PTGESO14684 152 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 SLC16A4O15374 487 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 CXCL14O95715 111 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 CTSAP10619 480 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 PLS3P13797 630 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 COASYQ13057 564 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 SMAD4Q13485 552 aaKnown RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 MCM6Q14566 821 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 ATF7IP2Q5U623 682 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 TMEM184AQ6ZMB5 413 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 HACE1Q8IYU2 909 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 RNF168Q8IYW5 571 aaPredicted RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 SMRP1Q8NCR6 262 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 KHSRPQ92945 711 aaKnown RBP eCLIP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 CALML4Q96GE6 196 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 CLIC6Q96NY7 704 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 ACO2Q99798 780 aaKnown RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 C17orf75Q9HAS0 396 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 TNFSF13BQ9Y275 285 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 PRG3Q9Y2Y8 225 aaPredicted RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 SRPRBQ9Y5M8 271 aaKnown RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 IRAK3Q9Y616 596 aa19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
SBDSP1-202ENST00000423945 ABLIM1O14639 778 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 CLASP2O75122 1294 aaKnown RBP19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 RECQL4O94761 1208 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 OR1G1P47890 313 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 GRIK3Q13003 919 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 NAB2Q15742 525 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 SMAD2Q15796 467 aaKnown RBP19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 TMEM132AQ24JP5 1023 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 TAS1R1Q7RTX1 841 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 GPBP1Q86WP2 473 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 HSCBQ8IWL3 235 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 TMEM161BQ8NDZ6 487 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 SPIRE2Q8WWL2 714 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 RAD54LQ92698 747 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 REEP2Q9BRK0 252 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 TARS2Q9BW92 718 aaKnown RBP19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 ZSCAN16Q9H4T2 348 aaPredicted RBP19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 KCND2Q9NZV8 630 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 CACNG4Q9UBN1 327 aa19.62■□□□□ 0.73
SBDSP1-202ENST00000423945 LILRB3O75022 631 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 PROZP22891 400 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 DHX8Q14562 1220 aaKnown RBP19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 SLC39A14Q15043 492 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 PTPN14Q15678 1187 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 DCAF4L1Q3SXM0 396 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 LLGL2Q6P1M3 1020 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 SYCE2Q6PIF2 218 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 CEP120Q8N960 986 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 RABGGTAQ92696 567 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 PAAF1Q9BRP4 392 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 ADPGKQ9BRR6 497 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 CDT1Q9H211 546 aa19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
SBDSP1-202ENST00000423945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.6■□□□□ 0.73
SBDSP1-202ENST00000423945 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
SBDSP1-202ENST00000423945 NASPP49321 788 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms