RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRIP11Q15643 1979 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 LPXNO60711 386 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 RB1P06400 928 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 CASP1P29466 404 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 AFMP43652 599 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 AFF1P51825 1210 aaKnown RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 ALCAMQ13740 583 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 PAN2Q504Q3 1202 aaKnown RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 NOMO2Q5JPE7 1267 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 GLB1LQ6UWU2 654 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 MPZL3Q6UWV2 235 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 GRAMD1CQ8IYS0 662 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 ZBTB45Q96K62 511 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 FAM161BQ96MY7 647 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 CDX2Q99626 313 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 PLVAPQ9BX97 442 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 FGFBP2Q9BYJ0 223 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 TRIM6Q9C030 488 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 HAPLN2Q9GZV7 340 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 MRPL44Q9H9J2 332 aaKnown RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 STYXL1Q9Y6J8 313 aa20.25■□□□□ 0.83
HDAC6-205ENST00000423941 TDRD15B5MCY1 1934 aaKnown RBP20.25■□□□□ 0.83
HDAC6-205ENST00000423941 MCF2P10911 925 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 CASP5P51878 434 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 ASIC1P78348 528 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 MCL1Q07820 350 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 SLC39A4Q6P5W5 647 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 EPM2AIP1Q7L775 607 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-205ENST00000423941 HACE1Q8IYU2 909 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 ABI1Q8IZP0 508 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 P2RX5Q93086 422 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 MRPL9Q9BYD2 267 aaKnown RBP20.24■□□□□ 0.83
HDAC6-205ENST00000423941 BLZF1Q9H2G9 400 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 KANSL3Q9P2N6 904 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 HCSTQ9UBK5 93 aa20.24■□□□□ 0.83
HDAC6-205ENST00000423941 COL4A4P53420 1690 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-205ENST00000423941 GOLGA6L4A6NEF3 574 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 ARL5CA6NH57 179 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 H3BNC9 293 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 GTPBP6O43824 516 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-205ENST00000423941 IBSPP21815 317 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-205ENST00000423941 GRM5P41594 1212 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 FAM160A1Q05DH4 1040 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 KCNA1Q09470 495 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 ADGRE1Q14246 886 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 XKR4Q5GH76 650 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 APBB1IPQ7Z5R6 666 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-205ENST00000423941 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 ARNTL2Q8WYA1 636 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 TIGD1Q96MW7 591 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 PRDM12Q9H4Q4 367 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 TBC1D13Q9NVG8 400 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 MIOSQ9NXC5 875 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 TBC1D7Q9P0N9 293 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 PCDHB13Q9Y5F0 798 aa20.23■□□□□ 0.83
HDAC6-205ENST00000423941 CITO14578 2027 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 A0A0B4J269 797 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 FAM189A1O60320 539 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 GADD45BO75293 160 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-205ENST00000423941 AKAP5P24588 427 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 DPYDQ12882 1025 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 ZNF568Q3ZCX4 644 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
HDAC6-205ENST00000423941 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 ALKAL1Q6UXT8 129 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
HDAC6-205ENST00000423941 GLIS3Q8NEA6 775 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 FBXO22Q8NEZ5 403 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 GAD1Q99259 594 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 NRDE2Q9H7Z3 1164 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 SNTG2Q9NY99 539 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 PLXNA4Q9HCM2 1894 aa20.22■□□□□ 0.83
HDAC6-205ENST00000423941 ANKRD63C9JTQ0 380 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 RFXAPO00287 272 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 EIF3DO15371 548 aaKnown RBP eCLIP20.21■□□□□ 0.83
HDAC6-205ENST00000423941 CLDN3O15551 220 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 MYBP10242 640 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 LAG3P18627 525 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 HOXD13P35453 343 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 DSC1Q08554 894 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 CEP120Q8N960 986 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 COLGALT1Q8NBJ5 622 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 ZNF507Q8TCN5 953 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 HPS3Q969F9 1004 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 LMCD1Q9NZU5 365 aa20.21■□□□□ 0.83
HDAC6-205ENST00000423941 REV3LO60673 3130 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 PTGESO14684 152 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 HNRNPDLO14979 420 aaKnown RBP20.2■□□□□ 0.82
HDAC6-205ENST00000423941 MEFVO15553 781 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-205ENST00000423941 B4GALT3O60512 393 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 NR1I2O75469 434 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 RECQL4O94761 1208 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 DDHD2O94830 711 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 GCNT3O95395 438 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 ADRB2P07550 413 aa20.2■□□□□ 0.82
HDAC6-205ENST00000423941 MLH1P40692 756 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms