RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 CHRNB2P17787 502 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 PLTPP55058 493 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 CEP120Q8N960 986 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
PTPRN-204ENST00000423636 CFAP58Q5T655 872 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF662Q6ZS27 426 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
PTPRN-204ENST00000423636 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 PDGFCQ9NRA1 345 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
PTPRN-204ENST00000423636 HSF2BPO75031 334 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 BCRP11274 1271 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 TRAF1Q13077 416 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 FKBP1CQ5VVH2 108 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 FBXO16Q8IX29 292 aaPredicted RBP12.85□□□□□ -0.35
PTPRN-204ENST00000423636 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 MTMR14Q8NCE2 650 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 AFG3L2Q9Y4W6 797 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 USP2O75604 605 aaPredicted RBP12.85□□□□□ -0.35
PTPRN-204ENST00000423636 ARIH2O95376 493 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 CYP2C8P10632 490 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 CETN1Q12798 172 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 EPS8L1Q8TE68 723 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
PTPRN-204ENST00000423636 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 PYGMP11217 842 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 SEC24CP53992 1094 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 TGFB2P61812 414 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 TMEM270Q6UE05 265 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 TMEM206Q9H813 350 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
PTPRN-204ENST00000423636 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 PRKCIP41743 596 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 GNGT1P63211 74 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 GTF2BQ00403 316 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 NNTQ13423 1086 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 EMC2Q15006 297 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 ATP13A4Q4VNC1 1196 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 LEKR1Q6ZMV7 388 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 HAUS1Q96CS2 278 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 IQCDQ96DY2 449 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 CYFIP2Q96F07 1278 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 STRA6Q9BX79 667 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 FBXL5Q9UKA1 691 aa12.84□□□□□ -0.35
PTPRN-204ENST00000423636 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
PTPRN-204ENST00000423636 PI4K2BG5E9Z4 385 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 CLDN3O15551 220 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 GGPS1O95749 300 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 LMNB1P20700 586 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 TMOD1P28289 359 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 KRT76Q01546 638 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 KAZNQ674X7 775 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 RFFLQ8WZ73 363 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 MRRFQ96E11 262 aaKnown RBP12.83□□□□□ -0.35
PTPRN-204ENST00000423636 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.83□□□□□ -0.35
PTPRN-204ENST00000423636 C10orf88Q9H8K7 445 aa12.83□□□□□ -0.35
PTPRN-204ENST00000423636 BZW2Q9Y6E2 419 aaKnown RBP12.83□□□□□ -0.35
PTPRN-204ENST00000423636 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
PTPRN-204ENST00000423636 K7ERI5 159 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 PIAS1O75925 651 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 CYP11B1P15538 503 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 CCT5P48643 541 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 FMO1Q01740 532 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 ODF2Q5BJF6 829 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 FAM76AQ8TAV0 307 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 ZNF302Q9NR11 478 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 FZD9O00144 591 aa12.83□□□□□ -0.36
PTPRN-204ENST00000423636 B4GALT5O43286 388 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms