RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 B4GALT5O43286 388 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 JAK2O60674 1132 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 EIF5BO60841 1220 aaKnown RBP17.91■□□□□ 0.46
COL18A1-205ENST00000423214 SEC24BO95487 1268 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 NPTXRO95502 500 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 ARL2P36404 184 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
COL18A1-205ENST00000423214 AMHR2Q16671 573 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 COLEC11Q9BWP8 271 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 DOCK6Q96HP0 2047 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 ZMYM2Q9UBW7 1377 aa17.91■□□□□ 0.46
COL18A1-205ENST00000423214 WNT7AO00755 349 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 LILRB3O75022 631 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 MCM7P33993 719 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 NEK4P51957 841 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 GRIK3Q13003 919 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 TMEM132AQ24JP5 1023 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 ZBTB8OSQ8IWT0 167 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 MCPH1Q8NEM0 835 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 FEZF2Q8TBJ5 459 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 PARP2Q9UGN5 583 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 MIA3Q5JRA6 1907 aa17.9■□□□□ 0.46
COL18A1-205ENST00000423214 F8W810 466 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 TEX28O15482 410 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 GALR2O43603 387 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-205ENST00000423214 ATP2B1P20020 1258 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 AKAP5P24588 427 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 DSG1Q02413 1049 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 FUT10Q6P4F1 479 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 MAEAQ7L5Y9 396 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 TAS1R1Q7RTX1 841 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-205ENST00000423214 RNF168Q8IYW5 571 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-205ENST00000423214 CMASQ8NFW8 434 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-205ENST00000423214 STAMQ92783 540 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 MTMR9Q96QG7 549 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 PRMT7Q9NVM4 692 aaPredicted RBP17.89■□□□□ 0.45
COL18A1-205ENST00000423214 MIOSQ9NXC5 875 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 ADAM28Q9UKQ2 775 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 CLUHO75153 1309 aa17.89■□□□□ 0.45
COL18A1-205ENST00000423214 CCDC195A0A1B0GUA6 201 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 H0Y858 1186 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.452e-11■■□□□ 13.8
COL18A1-205ENST00000423214 GBP2P32456 591 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-205ENST00000423214 GUCY1B3Q02153 619 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 CREMQ03060 361 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 TDGQ13569 410 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 ASTLQ6HA08 431 aaPredicted RBP17.88■□□□□ 0.45
COL18A1-205ENST00000423214 CYP26C1Q6V0L0 522 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 GLYCTKQ8IVS8 523 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 TMEM105Q8N8V8 129 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 FLCNQ8NFG4 579 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 ERMNQ8TAM6 284 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 PRIMPOLQ96LW4 560 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 GPRC5CQ9NQ84 441 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.88■□□□□ 0.45
COL18A1-205ENST00000423214 KLK14Q9P0G3 267 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 FBXL21Q9UKT6 434 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 DUSP12Q9UNI6 340 aa17.88■□□□□ 0.45
COL18A1-205ENST00000423214 PDCD11Q14690 1871 aaKnown RBP17.88■□□□□ 0.45
COL18A1-205ENST00000423214 A0A087WWV3 80 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 N4BP3O15049 544 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 GFRA3O60609 400 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 MYBP10242 640 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 USP41Q3LFD5 358 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 KIAA0319Q5VV43 1072 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 SMG7Q92540 1137 aaKnown RBP17.87■□□□□ 0.45
COL18A1-205ENST00000423214 B3GALT6Q96L58 329 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 C2orf40Q9H1Z8 148 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 TMEM60Q9H2L4 133 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 PIDD1Q9HB75 910 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 RXFP1Q9HBX9 757 aa17.87■□□□□ 0.45
COL18A1-205ENST00000423214 SF3B1O75533 1304 aaKnown RBP eCLIP17.87■□□□□ 0.452e-6■■■■■ 63.8
COL18A1-205ENST00000423214 A0A1B0GUA9 196 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 ARHGEF35A5YM69 484 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 ST18O60284 1047 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 GNL2Q13823 731 aaKnown RBP17.86■□□□□ 0.45
COL18A1-205ENST00000423214 CDCA2Q69YH5 1023 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-205ENST00000423214 POTEGQ6S5H5 508 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 CATSPER3Q86XQ3 398 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 PALB2Q86YC2 1186 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 HDAC7Q8WUI4 952 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 RIN2Q8WYP3 895 aaPredicted RBP17.86■□□□□ 0.45
COL18A1-205ENST00000423214 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 NACC1Q96RE7 527 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 ADPGKQ9BRR6 497 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 PLEKHA4Q9H4M7 779 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 IGSF9Q9P2J2 1179 aa17.86■□□□□ 0.45
COL18A1-205ENST00000423214 MYO15AQ9UKN7 3530 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 MED24O75448 989 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 TADA2AO75478 443 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 RFPL2O75678 378 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 EFEMP2O95967 443 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
COL18A1-205ENST00000423214 SPATA31D3P0C874 917 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms