RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 PDCD6IPQ8WUM4 868 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 FAM217BQ9NTX9 383 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 LTBP4Q8N2S1 1624 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 A0A087X0T9 212 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 PPP1R37O75864 691 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 FAM228BP0C875 321 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 GARSP41250 739 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 KYNUQ16719 465 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 REXO1L1PQ8IX06 675 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 CXorf38Q8TB03 319 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 DTX3LQ8TDB6 740 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 FBXO41Q8TF61 875 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 ALKBH8Q96BT7 664 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 RBAKQ9NYW8 714 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 TCP11X1B4DZS4 312 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 RAD51CO43502 376 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 PDHBP11177 359 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 ERVK-24P63145 666 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 PTPAQ15257 358 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 RFFLQ8WZ73 363 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
SEMA4D-208ENST00000422704 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 MAPK13O15264 365 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SOX5P35711 763 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 CASP4P49662 377 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 RGS7P49802 495 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 FAM102AQ5T9C2 384 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ICE2Q659A1 982 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SCN4BQ8IWT1 228 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 RNF149Q8NC42 400 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 CAPN6Q9Y6Q1 641 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 TUBGCP6Q96RT7 1819 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 DIAPH2O60879 1101 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 RHOBTB3O94955 611 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 KCNB1Q14721 858 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 GLE1Q53GS7 698 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 IZUMO3Q5VZ72 239 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 KIF2BQ8N4N8 673 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 FBXL13Q8NEE6 735 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 LRRC37BQ96QE4 947 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 CCT8L2Q96SF2 557 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 DISP2A7MBM2 1401 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 UBE4BO95155 1302 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 M0QYV0 167 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SLC37A4O43826 429 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ARSEP51690 589 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 SESN2P58004 480 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 KRT17Q04695 432 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NFIAQ12857 509 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ZNF34Q8IZ26 560 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 DHX35Q9H5Z1 703 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 STXBP3O00186 592 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 KIF3CO14782 793 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 KRT37O76014 449 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 CAMTA2O94983 1202 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 CDH6P55285 790 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NLRP11P59045 1033 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NME3Q13232 169 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ART3Q13508 389 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 STXBP2Q15833 593 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 GIMAP8Q8ND71 665 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 NSUN6Q8TEA1 469 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ANKRD7Q92527 254 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 TRIM55Q9BYV6 548 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 POLR3FQ9H1D9 316 aaPredicted RBP11.28□□□□□ -0.6
SEMA4D-208ENST00000422704 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms