RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 KANSL3Q9P2N6 904 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 DNAJB4Q9UDY4 337 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 STK39Q9UEW8 545 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 DBR1Q9UK59 544 aaKnown RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 MTMR6Q9Y217 621 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 ZDHHC9Q9Y397 364 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 PRR33A8MZF0 331 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 INO80B-WBP1J3KQ70 363 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CLASP2O75122 1294 aaKnown RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CXCL14O95715 111 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 EDN1P05305 212 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ITGA4P13612 1032 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 HOXB8P17481 243 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 GLRA2P23416 452 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CDC25AP30304 524 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 TRAPPC10P48553 1259 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 SLC11A1P49279 550 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 MBTD1Q05BQ5 628 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 PTGDRQ13258 359 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 GNL2Q13823 731 aaKnown RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 GIT2Q14161 759 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 AMHR2Q16671 573 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 HERC4Q5GLZ8 1057 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 TTC38Q5R3I4 469 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 TMEM173Q86WV6 379 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZNF280BQ86YH2 543 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 RNF135Q8IUD6 432 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 VPS52Q8N1B4 723 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ERMNQ8TAM6 284 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ASAP3Q8TDY4 903 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 BCL7CQ8WUZ0 217 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 SUSD6Q92537 303 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CASP10Q92851 521 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 NACC1Q96RE7 527 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 PHF7Q9BWX1 381 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 GBP3Q9H0R5 595 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZBP1Q9H171 429 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 CSRNP2Q9H175 543 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 S1PR5Q9H228 398 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 RSAD1Q9HA92 442 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 RRAGDQ9NQL2 400 aaPredicted RBP9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 HCN4Q9Y3Q4 1203 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 IPPQ9Y573 584 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 WDFY4Q6ZS81 3184 aa9.08□□□□□ -0.96
TRIM43CP-201ENST00000422468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 GPR37O15354 613 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 INPPL1O15357 1258 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 B4GALT3O60512 393 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 USO1O60763 962 aaKnown RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 DDHD2O94830 711 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 POMCP01189 267 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 ALDH2P05091 517 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 HSP90AA1P07900 732 aaKnown RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 CTSAP10619 480 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 ARF4P18085 180 aaPredicted RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 SYT1P21579 422 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 MUTP22033 750 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 FECHP22830 423 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 RPA1P27694 616 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 CA8P35219 290 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 AFF1P51825 1210 aaKnown RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 PTPAQ15257 358 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 KLHL40Q2TBA0 621 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 SYCE2Q6PIF2 218 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 USP49Q70CQ1 688 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 MCPH1Q8NEM0 835 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 CPB2Q96IY4 423 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 FAM193BQ96PV7 902 aaPredicted RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 VN1R3Q9BXE9 311 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 EIF2AQ9BY44 585 aaKnown RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 POLD4Q9HCU8 107 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 MUTYHQ9UIF7 546 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 NOL7Q9UMY1 257 aaKnown RBP9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 FAN1Q9Y2M0 1017 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 HCFC2Q9Y5Z7 792 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 TCHHQ07283 1943 aa9.07□□□□□ -0.96
TRIM43CP-201ENST00000422468 A0A1B0GUA9 196 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 ARHGEF35A5YM69 484 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 ARL5CA6NH57 179 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 LRRIQ4A6NIV6 560 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 TRIM66O15016 1216 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PLA2G5P39877 138 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 ITIH3Q06033 890 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PDIA5Q14554 519 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 HAUS3Q68CZ6 603 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 SLC27A1Q6PCB7 646 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 MAEAQ7L5Y9 396 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 HACE1Q8IYU2 909 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 AUTS2Q8WXX7 1259 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 BSNDQ8WZ55 320 aa9.06□□□□□ -0.96
TRIM43CP-201ENST00000422468 EDAQ92838 391 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms