RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 C1orf228Q6PIY5 440 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 BBS5Q8N3I7 341 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 FBXL13Q8NEE6 735 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 GABPB2Q8TAK5 448 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 PRPF31Q8WWY3 499 aaKnown RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 HAUS1Q96CS2 278 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 C12orf42Q96LP6 360 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 GOLGA6L7A0A1B0GV03 622 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 VTNP04004 478 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ADORA2BP29275 332 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 BFSP2Q13515 415 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 TMEM119Q4V9L6 283 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 CCDC60Q8IWA6 550 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 TINF2Q9BSI4 451 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 IFT122Q9HBG6 1241 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ADAM22Q9P0K1 906 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ZBTB22O15209 634 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 FKTNO75072 461 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 NPTX2P47972 431 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF112Q9UJU3 913 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ZC3H4Q9UPT8 1303 aaKnown RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 KRIT1O00522 736 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PRPSAP2O60256 369 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 MUTP22033 750 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 EDRF1Q3B7T1 1238 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 NOTUMQ6P988 496 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 MICALL1Q8N3F8 863 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PPP1R13LQ8WUF5 828 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 MMTAG2Q9BU76 263 aaKnown RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 KLK14Q9P0G3 267 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 LIMA1Q9UHB6 759 aaKnown RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 IGSF9BQ9UPX0 1349 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 LRRC53A6NM62 1247 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PGK1P00558 417 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 ZBTB48P10074 688 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 INSRRP14616 1297 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 DYNLT1P63172 113 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 BEX3Q00994 111 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 ITGB3BPQ13352 177 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 TMEM132DQ14C87 1099 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 GLRA4Q5JXX5 417 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 FRMD5Q7Z6J6 570 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 SCFD1Q8WVM8 642 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 TMEM169Q96HH4 297 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 NHEJ1Q9H9Q4 299 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 VTA1Q9NP79 307 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 FLT3LGP49771 235 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 SNRNP35Q16560 246 aaKnown RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PAN2Q504Q3 1202 aaKnown RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 SEZ6Q53EL9 994 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PPP6R3Q5H9R7 873 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-201ENST00000421999 RFX6Q8HWS3 928 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 CTAGE3PQ8IX95 158 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 KIAA0895Q8NCT3 520 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 OSMRQ99650 979 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 C11orf70Q9BRQ4 267 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 KCNK9Q9NPC2 374 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 PDGFCQ9NRA1 345 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 RBPJLQ9UBG7 517 aa10.43□□□□□ -0.74
CMSS1-201ENST00000421999 A0A1B0GTH6 734 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 M0QYV0 167 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 NPTXRO95502 500 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 GEN1Q17RS7 908 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 CXCL17Q6UXB2 119 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SHISA4Q96DD7 197 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ZBED3Q96IU2 234 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TBX20Q9UMR3 447 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 FNDC3AQ9Y2H6 1198 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 C2CD2LO14523 706 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SARSP49591 514 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 PMS1P54277 932 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 KYAT1Q16773 422 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF484Q5JVG2 852 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF720Q7Z2F6 126 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 PANX2Q96RD6 677 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SELENOSQ9BQE4 189 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SENP6Q9GZR1 1112 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 AGPAT3Q9NRZ7 376 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 USP20Q9Y2K6 914 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 FAM237AA0A1B0GTK4 181 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 EIF3DO15371 548 aaKnown RBP eCLIP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 B3GAT3O94766 335 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 NDUFA10O95299 355 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 SLC4A1P02730 911 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 PDGFRBP09619 1106 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 TBXAS1P24557 533 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ETF1P62495 437 aaKnown RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 RBP5P82980 135 aa10.42□□□□□ -0.74
CMSS1-201ENST00000421999 CACNB2Q08289 660 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-201ENST00000421999 ECM1Q16610 540 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms