RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SH3TC2Q8TF17 1288 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 VOPP1Q96AW1 172 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 GINM1Q9NU53 330 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
SFXN1-202ENST00000421887 LAMB1P07942 1786 aa6.33□□□□□ -1.4
SFXN1-202ENST00000421887 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
SFXN1-202ENST00000421887 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 MAFKO60675 156 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 CDC14BO60729 498 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 CHGBP05060 677 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 ZNF76P36508 570 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 GPSM2P81274 684 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 SKIDA1Q1XH10 827 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 HSP90AB3PQ58FF7 597 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 MCM10Q7L590 875 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 ZNF627Q7L945 461 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 APOBEC3FQ8IUX4 373 aaKnown RBP6.32□□□□□ -1.4
SFXN1-202ENST00000421887 SCUBE1Q8IWY4 988 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 ZNF483Q8TF39 744 aaPredicted RBP6.32□□□□□ -1.4
SFXN1-202ENST00000421887 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 BCL11AQ9H165 835 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 PRO3102Q9H379 93 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 EPB41L1Q9H4G0 881 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 ARHGAP20Q9P2F6 1191 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 ASH2LQ9UBL3 628 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 OAZ3Q9UMX2 235 aa6.32□□□□□ -1.4
SFXN1-202ENST00000421887 REXO2Q9Y3B8 237 aaKnown RBP6.32□□□□□ -1.4
SFXN1-202ENST00000421887 A0A0C4DFX4 3053 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 RAMP2O60895 175 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 UFL1O94874 794 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
SFXN1-202ENST00000421887 LCP1P13796 627 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 ERCC3P19447 782 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 ACRV1P26436 265 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 GIPRP48546 466 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 ATXN1P54253 815 aaKnown RBP6.31□□□□□ -1.4
SFXN1-202ENST00000421887 PRMT2P55345 433 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 TAF7Q15545 349 aaPredicted RBP6.31□□□□□ -1.4
SFXN1-202ENST00000421887 LDLRAD1Q5T700 205 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 Q7L0L9 218 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 REXO1L1PQ8IX06 675 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 TBC1D16Q8TBP0 767 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 BTN2A2Q8WVV5 523 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 DPYSL5Q9BPU6 564 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 KATNBL1Q9H079 304 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 C12orf65Q9H3J6 166 aaKnown RBP6.31□□□□□ -1.4
SFXN1-202ENST00000421887 HSPBP1Q9NZL4 362 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 STAP2Q9UGK3 403 aa6.31□□□□□ -1.4
SFXN1-202ENST00000421887 UNCXA6NJT0 531 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 H0Y858 1186 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 KRIT1O00522 736 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 WNT10BO00744 389 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 SLC27A2O14975 620 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 PRKAR2BP31323 418 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 IL12RB1P42701 662 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 GJA8P48165 433 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 CSRP2Q16527 193 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 MAMDC4Q6UXC1 1216 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 TRIM48Q8IWZ4 208 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
SFXN1-202ENST00000421887 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
SFXN1-202ENST00000421887 GIPC2Q8TF65 315 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 CELF1Q92879 486 aaKnown RBP6.3□□□□□ -1.4
SFXN1-202ENST00000421887 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 MRGPRX3Q96LB0 322 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 KCND1Q9NSA2 647 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 MTMR10Q9NXD2 777 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 EFR3BQ9Y2G0 817 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 HTTP42858 3142 aa6.3□□□□□ -1.4
SFXN1-202ENST00000421887 MYO3BQ8WXR4 1341 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 HTATSF1O43719 755 aaKnown RBP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 GJB1P08034 283 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 NAT2P11245 290 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 HOXD10P28358 340 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 MMP14P50281 582 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 RRADP55042 308 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 RPS8P62241 208 aaKnown RBP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 UBXN2AP68543 259 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 COL9A2Q14055 689 aaPredicted RBP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 PRSS53Q2L4Q9 553 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 SUPT20HL1Q3ZLR7 823 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
SFXN1-202ENST00000421887 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 ANKRD13AQ8IZ07 590 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 RAET1EQ8TD07 263 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 FAM122AQ96E09 287 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 CLMNQ96JQ2 1002 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 MIS18AQ9NYP9 233 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 SLC30A1Q9Y6M5 507 aa6.29□□□□□ -1.4
SFXN1-202ENST00000421887 COL1A1P02452 1464 aaPredicted RBP6.28□□□□□ -1.4
SFXN1-202ENST00000421887 RPTORQ8N122 1335 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms