RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 F8W810 466 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 H0Y858 1186 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 N4BP1O75113 896 aaKnown RBP20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 OR1G1P47890 313 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 CLCN5P51795 746 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 ME3Q16798 604 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 TAS1R1Q7RTX1 841 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 NSUN7Q8NE18 718 aaKnown RBP20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 ATOH1Q92858 354 aaPredicted RBP20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 MTMR9Q96QG7 549 aa20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 TTC12Q9H892 705 aaPredicted RBP20.7■□□□□ 0.9
AC004540.1-203ENST00000421862 SPDYE4A6NLX3 237 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 C2CD2LO14523 706 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 B4GALT5O43286 388 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 NEMFO60524 1076 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 GLUD1P00367 558 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 TDGQ13569 410 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 SLC27A1Q6PCB7 646 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 HDAC7Q8WUI4 952 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 KCNK12Q9HB15 430 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 DPP7Q9UHL4 492 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 CLUHO75153 1309 aa20.69■□□□□ 0.9
AC004540.1-203ENST00000421862 NBL1P41271 181 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 NCBP1Q09161 790 aaKnown RBP20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 GRIK3Q13003 919 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 CDCA2Q69YH5 1023 aaPredicted RBP20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 FUT10Q6P4F1 479 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 DIS3L2Q8IYB7 885 aaKnown RBP20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 HACE1Q8IYU2 909 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 NECAB1Q8N987 351 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 TRIM6Q9C030 488 aaPredicted RBP20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 POLR3FQ9H1D9 316 aaPredicted RBP20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 IGSF9Q9P2J2 1179 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 FAM186AA6NE01 2351 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 FANCMQ8IYD8 2048 aa20.68■□□□□ 0.9
AC004540.1-203ENST00000421862 A0A1B0GUA9 196 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 POTEMA6NI47 508 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 BTBD18B2RXH4 712 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 XRCC6P12956 609 aaKnown RBP eCLIP20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 NPR3P17342 541 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 AOC1P19801 751 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 ELMSAN1Q6PJG2 1045 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 ZNF707Q96C28 371 aaPredicted RBP20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 PRIMPOLQ96LW4 560 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 FNIP2Q9P278 1114 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 EPS15L1Q9UBC2 864 aa20.67■□□□□ 0.9
AC004540.1-203ENST00000421862 CCDC195A0A1B0GUA6 201 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 USO1O60763 962 aaKnown RBP20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 NR1I2O75469 434 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 SPATA31C1P0DKV0 1188 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 ST3GAL1Q11201 340 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 PIGOQ8TEQ8 1089 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 CCDC43Q96MW1 224 aaKnown RBP20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 COLEC11Q9BWP8 271 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 APOL6Q9BWW8 343 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 GPR62Q9BZJ7 368 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 MFSD1Q9H3U5 465 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 ADAM28Q9UKQ2 775 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 RIF1Q5UIP0 2472 aaKnown RBP20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 SPTBN4Q9H254 2564 aa20.66■□□□□ 0.9
AC004540.1-203ENST00000421862 MIA3Q5JRA6 1907 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 PDCD11Q14690 1871 aaKnown RBP20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 JAK2O60674 1132 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 RFPL2O75678 378 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 NPTXRO95502 500 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 AKAP5P24588 427 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 TXKP42681 527 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 FAM187BQ17R55 369 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 CDR2LQ86X02 465 aaPredicted RBP20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 STAMQ92783 540 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 TMEM60Q9H2L4 133 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 PLEKHA4Q9H4M7 779 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 TUFT1Q9NNX1 390 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 PRMT7Q9NVM4 692 aaPredicted RBP20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 ZDHHC7Q9NXF8 308 aa20.65■□□□□ 0.9
AC004540.1-203ENST00000421862 CREMQ03060 361 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 USP41Q3LFD5 358 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 LILRA6Q6PI73 481 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 MCPH1Q8NEM0 835 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 B3GALT6Q96L58 329 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 FZD8Q9H461 694 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 GPRC5CQ9NQ84 441 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 NOTCH4Q99466 2003 aa20.64■□□□□ 0.89
AC004540.1-203ENST00000421862 GVINP1Q7Z2Y8 2422 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 SF3B1O75533 1304 aaKnown RBP eCLIP20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 PATJQ8NI35 1801 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 PRR23AA6NEV1 266 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 TGM5O43548 720 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 ASCL5Q7RTU5 278 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 CATSPER3Q86XQ3 398 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 CCDC105Q8IYK2 499 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 SMG7Q92540 1137 aaKnown RBP20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 MYADMQ96S97 322 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 CITO14578 2027 aa20.63■□□□□ 0.89
AC004540.1-203ENST00000421862 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
AC004540.1-203ENST00000421862 PTGESO14684 152 aa20.62■□□□□ 0.89
AC004540.1-203ENST00000421862 NARSO43776 548 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms