RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-202ENST00000421712 CDX2Q99626 313 aaPredicted RBP17.27■□□□□ 0.36
BRAT1-202ENST00000421712 GBP3Q9H0R5 595 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 SNTG2Q9NY99 539 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 KLK14Q9P0G3 267 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 GDAQ9Y2T3 454 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 GIT1Q9Y2X7 761 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 PCDHB12Q9Y5F1 795 aa17.27■□□□□ 0.36
BRAT1-202ENST00000421712 FNDC1Q4ZHG4 1894 aaPredicted RBP17.27■□□□□ 0.35
BRAT1-202ENST00000421712 FRMD3A2A2Y4 597 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 HNRNPDLO14979 420 aaKnown RBP17.26■□□□□ 0.35
BRAT1-202ENST00000421712 CLDN3O15551 220 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 TOM1L1O75674 476 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 POMCP01189 267 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 BMPR1AP36894 532 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 OSTNP61366 133 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 ZPBP2Q6X784 338 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 KRBA2Q6ZNG9 492 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 UNC13DQ70J99 1090 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 MYLIPQ8WY64 445 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 CLP1Q92989 425 aaKnown RBP17.26■□□□□ 0.35
BRAT1-202ENST00000421712 HPS3Q969F9 1004 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 GUCD1Q96NT3 240 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 RPS6KC1Q96S38 1066 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 GAD1Q99259 594 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-202ENST00000421712 CDT1Q9H211 546 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 OLFML3Q9NRN5 406 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 EXOC7Q9UPT5 735 aa17.26■□□□□ 0.35
BRAT1-202ENST00000421712 PVALEFA0A1B0GWK0 134 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 ARL5CA6NH57 179 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 EPOPA6NHQ4 379 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
BRAT1-202ENST00000421712 MYBP10242 640 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 MLH1P40692 756 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 GPM6BQ13491 265 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 GDPD5Q8WTR4 605 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 RSPH1Q8WYR4 309 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
BRAT1-202ENST00000421712 HVCN1Q96D96 273 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 ACCSQ96QU6 501 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 ST6GALNAC4Q9H4F1 302 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 EXOC1Q9NV70 894 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 TBC1D13Q9NVG8 400 aa17.25■□□□□ 0.35
BRAT1-202ENST00000421712 ZC3H11AO75152 810 aaKnown RBP eCLIP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 GADD45BO75293 160 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 PRPF40AO75400 957 aaKnown RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 RECQL4O94761 1208 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 PRPF6O94906 941 aaKnown RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 MYL1P05976 194 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 RB1P06400 928 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 MCF2P10911 925 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 FOSL2P15408 326 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 LAG3P18627 525 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 AFF1P51825 1210 aaKnown RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 YARSP54577 528 aaKnown RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 FAM160A1Q05DH4 1040 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 ALCAMQ13740 583 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 FAM26FQ5R3K3 315 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 C11orf84Q9BUA3 381 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-202ENST00000421712 PLVAPQ9BX97 442 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 CWH43Q9H720 699 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 SZT2Q5T011 3432 aa17.24■□□□□ 0.35
BRAT1-202ENST00000421712 TULP1O00294 542 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-202ENST00000421712 PROZP22891 400 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 ALDH7A1P49419 539 aaKnown RBP17.23■□□□□ 0.35
BRAT1-202ENST00000421712 SCNN1GP51170 649 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 CASP5P51878 434 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 CEP120Q8N960 986 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 COLGALT1Q8NBJ5 622 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 KCNN1Q92952 543 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 ZNF558Q96NG5 402 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 ACAP3Q96P50 834 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 SLC39A2Q9NP94 309 aa17.23■□□□□ 0.35
BRAT1-202ENST00000421712 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
BRAT1-202ENST00000421712 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 H3BNC9 293 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 PPP1R37O75864 691 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 CSPG5O95196 566 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 PIGRP01833 764 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 RPN1P04843 607 aaKnown RBP17.22■□□□□ 0.35
BRAT1-202ENST00000421712 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
BRAT1-202ENST00000421712 PBX3P40426 434 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms