RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MARCKSL1P49006 195 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 EMC2Q15006 297 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 LEKR1Q6ZMV7 388 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 MAP4K3Q8IVH8 894 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 SH2D3CQ8N5H7 860 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 FBXL13Q8NEE6 735 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
DDX56-203ENST00000421223 PSD3Q9NYI0 1048 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 CALCOCO1Q9P1Z2 691 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 ZNF112Q9UJU3 913 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
DDX56-203ENST00000421223 IRF6O14896 467 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 DAPK3O43293 454 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 SPOPO43791 374 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 MAPTP10636 758 aaKnown RBP11.79□□□□□ -0.52
DDX56-203ENST00000421223 ITIH3Q06033 890 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 EXOC4Q96A65 974 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ARL8AQ96BM9 186 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 TRIM51Q9BSJ1 452 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 PNMA2Q9UL42 364 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ZNF233A6NK53 670 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 XKR3Q5GH77 459 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 ABHD15Q6UXT9 468 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
DDX56-203ENST00000421223 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 KRT35Q92764 455 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 CDHR1Q96JP9 859 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
DDX56-203ENST00000421223 PPP1R16BQ96T49 567 aa11.79□□□□□ -0.52
DDX56-203ENST00000421223 MAFGO15525 162 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 DKC1O60832 514 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX56-203ENST00000421223 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 NF2P35240 595 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 GJC1P36383 396 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 PDE6CP51160 858 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 OSTNP61366 133 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 GPC5P78333 572 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 KIF22Q14807 665 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 OR2W6PQ8NHA6 318 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ALG3Q92685 438 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ZBTB10Q96DT7 871 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ZIM3Q96PE6 472 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 SUCLA2Q9P2R7 463 aaPredicted RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 SPATA31C2B4DYI2 1134 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 CYP24A1Q07973 514 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 DRP2Q13474 957 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 MYBPC2Q14324 1141 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ZSCAN26Q16670 478 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 GLE1Q53GS7 698 aaKnown RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 EMBQ6PCB8 327 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 FAM76AQ8TAV0 307 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ASAP3Q8TDY4 903 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 CPA5Q8WXQ8 436 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 TMEM8AQ9HCN3 771 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 FBXO40Q9UH90 709 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 GGPS1O95749 300 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 CYP11B1P15538 503 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ATP4AP20648 1035 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 COMTP21964 271 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 WNT7BP56706 349 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 GHRHRQ02643 423 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 XRRA1Q6P2D8 792 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX56-203ENST00000421223 UBLCP1Q8WVY7 318 aaPredicted RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 ZNF408Q9H9D4 720 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 AGO2Q9UKV8 859 aaKnown RBP11.78□□□□□ -0.52
DDX56-203ENST00000421223 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
DDX56-203ENST00000421223 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 CHRNB2P17787 502 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 PIK3CAP42336 1068 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 WDR44Q5JSH3 913 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 ZFYVE27Q5T4F4 411 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 DAB2IPQ5VWQ8 1189 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 TAS1R3Q7RTX0 852 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 USP37Q86T82 979 aa11.77□□□□□ -0.52
DDX56-203ENST00000421223 GPC2Q8N158 579 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms