RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TBC1D17Q9HA65 648 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 MYH15Q9Y2K3 1946 aa14.36□□□□□ -0.11
LINC00339-203ENST00000420503 VWA8A3KMH1 1905 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 INO80B-WBP1J3KQ70 363 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 STK25O00506 426 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 TGM5O43548 720 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 CTDNEP1O95476 244 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 ADH1AP07327 375 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 GLULP15104 373 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 ARF4P18085 180 aaPredicted RBP14.35□□□□□ -0.11
LINC00339-203ENST00000420503 PSMA5P28066 241 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 RFC5P40937 340 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 PTENP60484 403 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 DSG1Q02413 1049 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 NR5A1Q13285 461 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 EPHA7Q15375 998 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 MTRQ99707 1265 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 GPRC5CQ9NQ84 441 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 CHST7Q9NS84 486 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 IGSF9Q9P2J2 1179 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
LINC00339-203ENST00000420503 FANCMQ8IYD8 2048 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 NOTCH4Q99466 2003 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 CCDC194A0A1B0GVG4 234 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 ADAM12O43184 909 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 ERLIN2O94905 339 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 NPTXRO95502 500 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 GLRA2P23416 452 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 ID4P47928 161 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 FOSBP53539 338 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 HTR4Q13639 388 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 FUT10Q6P4F1 479 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 RSPH1Q8WYR4 309 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
LINC00339-203ENST00000420503 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 CSRNP2Q9H175 543 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 DLGAP2Q9P1A6 1054 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 NUMBLQ9Y6R0 609 aa14.34□□□□□ -0.11
LINC00339-203ENST00000420503 DNAH14Q0VDD8 3507 aa14.33□□□□□ -0.11
LINC00339-203ENST00000420503 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
LINC00339-203ENST00000420503 SLITRK3O94933 977 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 EDN1P05305 212 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 NOTUMQ6P988 496 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 LILRA6Q6PI73 481 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 MAEAQ7L5Y9 396 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 DCLK2Q8N568 766 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 ZNF274Q96GC6 653 aaPredicted RBP14.33□□□□□ -0.12
LINC00339-203ENST00000420503 EIF2AK1Q9BQI3 630 aaKnown RBP14.33□□□□□ -0.12
LINC00339-203ENST00000420503 RTP3Q9BQQ7 232 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 WNT16Q9UBV4 365 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 TPCN1Q9ULQ1 816 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
LINC00339-203ENST00000420503 MED19A0JLT2 244 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-203ENST00000420503 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 ANHXE9PGG2 379 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 SRFP11831 508 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 LAMP2P13473 410 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 ARL2P36404 184 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 PARM1Q6UWI2 310 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 GRASPQ7Z6J2 395 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-203ENST00000420503 KIAA2013Q8IYS2 634 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 PIGOQ8TEQ8 1089 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 FGF14Q92915 247 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
LINC00339-203ENST00000420503 ZSWIM4Q9H7M6 989 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 ARHGEF3Q9NR81 526 aa14.32□□□□□ -0.12
LINC00339-203ENST00000420503 FRYLO94915 3013 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
LINC00339-203ENST00000420503 KIF4AO95239 1232 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 LARGE1O95461 756 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 FDPSP14324 419 aaKnown RBP14.31□□□□□ -0.12
LINC00339-203ENST00000420503 GPC5P78333 572 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 GALNT17Q6IS24 598 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 POTEHQ6S545 545 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-203ENST00000420503 MAML2Q8IZL2 1156 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-203ENST00000420503 TCP11Q8WWU5 503 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 BSNDQ8WZ55 320 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 PRKD2Q9BZL6 878 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 MTF2Q9Y483 593 aaPredicted RBP14.31□□□□□ -0.12
LINC00339-203ENST00000420503 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 TRIP11Q15643 1979 aa14.31□□□□□ -0.12
LINC00339-203ENST00000420503 PTGESO14684 152 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms