RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 KIFAP3Q92845 792 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 RNF39Q9H2S5 420 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 TSHZ2Q9NRE2 1034 aa23.58■■□□□ 1.37
PTPN4-202ENST00000420482 B4GALT3O60512 393 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 EFNA5P52803 228 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 NHLH1Q02575 133 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 DSC1Q08554 894 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 GRIK3Q13003 919 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 PTGDRQ13258 359 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 PRPF4BQ13523 1007 aaKnown RBP23.57■■□□□ 1.36
PTPN4-202ENST00000420482 RARS2Q5T160 578 aaKnown RBP23.57■■□□□ 1.36
PTPN4-202ENST00000420482 KRT79Q5XKE5 535 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 KIAA1841Q6NSI8 718 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 APBB1IPQ7Z5R6 666 aaPredicted RBP23.57■■□□□ 1.36
PTPN4-202ENST00000420482 FBXL18Q96ME1 805 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 ZFP42Q96MM3 310 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 FZD8Q9H461 694 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 SFXN1Q9H9B4 322 aa23.57■■□□□ 1.36
PTPN4-202ENST00000420482 ADH1AP07327 375 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 EPCAMP16422 314 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 AKAP5P24588 427 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 MCM2P49736 904 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 ZXDAP98168 799 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 MCTP1Q6DN14 999 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 TRIM67Q6ZTA4 783 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 SNX29Q8TEQ0 813 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 SLC22A17Q8WUG5 538 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 KLHL5Q96PQ7 755 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 HERC2P3Q9BVR0 1158 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 VN1R3Q9BXE9 311 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 BHMT2Q9H2M3 363 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 KIAA1024Q9UPX6 916 aa23.56■■□□□ 1.36
PTPN4-202ENST00000420482 PRKCBP05771 671 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 CNPP09543 421 aaKnown RBP23.55■■□□□ 1.36
PTPN4-202ENST00000420482 PRPHP41219 470 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 GLUD2P49448 558 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 RILPL1Q5EBL4 403 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 DTHD1Q6ZMT9 781 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 CDR2LQ86X02 465 aaPredicted RBP23.55■■□□□ 1.36
PTPN4-202ENST00000420482 C4orf32Q8N8J7 132 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 IGSF22Q8N9C0 903 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 DDX19AQ9NUU7 478 aaKnown RBP23.55■■□□□ 1.36
PTPN4-202ENST00000420482 DNM3Q9UQ16 869 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 TDRD15B5MCY1 1934 aaKnown RBP23.55■■□□□ 1.36
PTPN4-202ENST00000420482 ZDBF2Q9HCK1 2354 aa23.55■■□□□ 1.36
PTPN4-202ENST00000420482 H3BQV1 296 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 ACKR2O00590 384 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 C2CD2LO14523 706 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 CLCN4P51793 760 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 NBR1Q14596 966 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 PTPN21Q16825 1174 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 BMP8AQ7Z5Y6 402 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 PLCD3Q8N3E9 789 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 POMKQ9H5K3 350 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 MARCH5Q9NX47 278 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 PCDHB6Q9Y5E3 794 aa23.54■■□□□ 1.36
PTPN4-202ENST00000420482 TMEM221A6NGB7 291 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 M0R296 226 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 LIG1P18858 919 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 SP100P23497 879 aaPredicted RBP23.53■■□□□ 1.36
PTPN4-202ENST00000420482 CREMQ03060 361 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 SIGLEC14Q08ET2 396 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 PBXIP1Q96AQ6 731 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 PDZD7Q9H5P4 517 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.53■■□□□ 1.36
PTPN4-202ENST00000420482 MIOSQ9NXC5 875 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 PHLPP2Q6ZVD8 1323 aa23.53■■□□□ 1.36
PTPN4-202ENST00000420482 LILRB3O75022 631 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 MRE11P49959 708 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 TOB1P50616 345 aaPredicted RBP23.52■■□□□ 1.36
PTPN4-202ENST00000420482 USP41Q3LFD5 358 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 DCAF4L1Q3SXM0 396 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 SUGP1Q8IWZ8 645 aaKnown RBP23.52■■□□□ 1.36
PTPN4-202ENST00000420482 GPR65Q8IYL9 337 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 C12orf76Q8N812 135 aaPredicted RBP23.52■■□□□ 1.36
PTPN4-202ENST00000420482 TDRD5Q8NAT2 981 aaKnown RBP23.52■■□□□ 1.36
PTPN4-202ENST00000420482 KLK14Q9P0G3 267 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 ADAM28Q9UKQ2 775 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 USTQ9Y2C2 406 aa23.52■■□□□ 1.36
PTPN4-202ENST00000420482 TADA2AO75478 443 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 GLUD1P00367 558 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 DSG1Q02413 1049 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 TUSC3Q13454 348 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 TMC5Q6UXY8 1006 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 C15orf39Q6ZRI6 1047 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 KCTD17Q8N5Z5 321 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 BSNDQ8WZ55 320 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 ACSF2Q96CM8 615 aaPredicted RBP23.51■■□□□ 1.35
PTPN4-202ENST00000420482 TMX3Q96JJ7 454 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 DRC1Q96MC2 740 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 CCDC113Q9H0I3 377 aa23.51■■□□□ 1.35
PTPN4-202ENST00000420482 K7ERI5 159 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 C1RP00736 705 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 THP07101 528 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 MTMR3Q13615 1198 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 HSP90AA2PQ14568 343 aaPredicted RBP23.5■■□□□ 1.35
PTPN4-202ENST00000420482 KIAA0319Q5VV43 1072 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 FUT10Q6P4F1 479 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 CYP26C1Q6V0L0 522 aa23.5■■□□□ 1.35
PTPN4-202ENST00000420482 CCDC149Q6ZUS6 474 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms