RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 VAV3Q9UKW4 847 aa11.41□□□□□ -0.58
TNFAIP3-202ENST00000420009 PPME1Q9Y570 386 aa11.41□□□□□ -0.58
TNFAIP3-202ENST00000420009 IPPQ9Y573 584 aa11.41□□□□□ -0.58
TNFAIP3-202ENST00000420009 NUMBLQ9Y6R0 609 aa11.41□□□□□ -0.58
TNFAIP3-202ENST00000420009 M0R2N6 131 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 EML1O00423 815 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 TGM5O43548 720 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 SPATA31D3P0C874 917 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 ITGA4P13612 1032 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 RFC5P40937 340 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 QARSP47897 775 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 STARD6P59095 220 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 LAMTOR4Q0VGL1 99 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 PPP2R5CQ13362 524 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 GSE1Q14687 1217 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 SPATA31D4Q6ZUB0 917 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 Q6ZUG5 572 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 DCLK2Q8N568 766 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 TMEM143Q96AN5 459 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 CCDC51Q96ER9 411 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 GAD1Q99259 594 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 EIF2AQ9BY44 585 aaKnown RBP11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 PRKD2Q9BZL6 878 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 FNIP2Q9P278 1114 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
TNFAIP3-202ENST00000420009 SLC37A4O43826 429 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 GAS2O43903 313 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 TSPAN1O60635 241 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 LRRN2O75325 713 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 PSEN1P49768 467 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 SCNN1GP51170 649 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 NLRP5P59047 1200 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 PCBP1Q15365 356 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 NPY5RQ15761 445 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZNF528Q3MIS6 628 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 FUT10Q6P4F1 479 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 FERMT3Q86UX7 667 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 PALB2Q86YC2 1186 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 RNF149Q8NC42 400 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 DAGLBQ8NCG7 672 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 GSTCDQ8NEC7 633 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 CEP170P1Q96L14 293 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 B3GALT6Q96L58 329 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 DDX23Q9BUQ8 820 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 GPR62Q9BZJ7 368 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 PIDD1Q9HB75 910 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 MIOSQ9NXC5 875 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 HES2Q9Y543 173 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 EPG5Q9HCE0 2579 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 COL4A3Q01955 1670 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZMYM2Q9UBW7 1377 aa11.39□□□□□ -0.59
TNFAIP3-202ENST00000420009 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 SPTLC1O15269 473 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 DKC1O60832 514 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■■□□ 16.1
TNFAIP3-202ENST00000420009 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 ZMYND10O75800 440 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 ERLIN2O94905 339 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 AXLP30530 894 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 EVCP57679 992 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 GPC5P78333 572 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 CREMQ03060 361 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 EMC2Q15006 297 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 AMHR2Q16671 573 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 USP41Q3LFD5 358 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 NOTUMQ6P988 496 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 ST13P5Q8NFI4 369 aaPredicted RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 FGF14Q92915 247 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 SHDQ96IW2 340 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 COLEC11Q9BWP8 271 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 NXF3Q9H4D5 531 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 KCNMB3Q9NPA1 279 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 FBXO4Q9UKT5 387 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 GIT1Q9Y2X7 761 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 CACNA1BQ00975 2339 aa11.38□□□□□ -0.59
TNFAIP3-202ENST00000420009 KANSL1LA0AUZ9 987 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 ASAP2O43150 1006 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 NR1I2O75469 434 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 RPL17P18621 184 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 RPS6KB1P23443 525 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 FSHRP23945 695 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 PDIA3P30101 505 aaKnown RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 PTENP60484 403 aa11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 RSPO4Q2I0M5 234 aaPredicted RBP11.37□□□□□ -0.59
TNFAIP3-202ENST00000420009 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms