RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 DIS3LQ8TF46 1054 aaKnown RBP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 CCDC51Q96ER9 411 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 CELF4Q9BZC1 486 aaKnown RBP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 EDEM3Q9BZQ6 932 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 VPS16Q9H269 839 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 C11orf49Q9H6J7 331 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 STARD7Q9NQZ5 370 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 TAB2Q9NYJ8 693 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 AGO2Q9UKV8 859 aaKnown RBP15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 USP20Q9Y2K6 914 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 DAAM1Q9Y4D1 1078 aa15.54■□□□□ 0.08
SHMT1P1-201ENST00000419974 ZNF233A6NK53 670 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 TISP43B9A030 160 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 OGTO15294 1046 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 STX10O60499 249 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 TSPAN1O60635 241 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 AFPP02771 609 aaKnown RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 ADRB2P07550 413 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 MCF2P10911 925 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 CYP2J2P51589 502 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 GSDMDP57764 484 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 MRPS6P82932 125 aaKnown RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 UBXN1Q04323 297 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 NCBP1Q09161 790 aaKnown RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 KCNH2Q12809 1159 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 SNX17Q15036 470 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 PTGISQ16647 500 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 TRIM71Q2Q1W2 868 aaKnown RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 CRELD2Q6UXH1 353 aaPredicted RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 APBB1IPQ7Z5R6 666 aaPredicted RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 PARD3BQ8TEW8 1205 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 NUP58Q9BVL2 599 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 SENP6Q9GZR1 1112 aaPredicted RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 HAPLN2Q9GZV7 340 aa15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 COLQQ9Y215 455 aaPredicted RBP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHMT1P1-201ENST00000419974 RANBP2P49792 3224 aaKnown RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 M0QZ92 97 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 N4BP1O75113 896 aaKnown RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 KRT13P13646 458 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 ARF4P18085 180 aaPredicted RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 HOXA11P31270 313 aaPredicted RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 ARID5BQ14865 1188 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 NOLC1Q14978 699 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 PSMD6Q15008 389 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 TOX2Q96NM4 488 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 TRAIPQ9BWF2 469 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 FAM49AQ9H0Q0 323 aaPredicted RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 AGPAT5Q9NUQ2 364 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 FBXL5Q9UKA1 691 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 CPSF3Q9UKF6 684 aaKnown RBP15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 SIK3Q9Y2K2 1263 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 TRPV2Q9Y5S1 764 aa15.52■□□□□ 0.08
SHMT1P1-201ENST00000419974 MROH7Q68CQ1 1323 aa15.52■□□□□ 0.07
SHMT1P1-201ENST00000419974 KAT6AQ92794 2004 aa15.52■□□□□ 0.07
SHMT1P1-201ENST00000419974 TTLL13PA6NNM8 815 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 ERLIN2O94905 339 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 CD4P01730 458 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 VAMP7P51809 220 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 AP3M2P53677 418 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 SURF1Q15526 300 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 DCAF4L1Q3SXM0 396 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 ANKRD33Q7Z3H0 272 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 CAGE1Q8TC20 777 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 TSPAN18Q96SJ8 248 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 MSTO1Q9BUK6 570 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 PRO3102Q9H379 93 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 PCIF1Q9H4Z3 704 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 PDZD7Q9H5P4 517 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 PLCB1Q9NQ66 1216 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 CHST12Q9NRB3 414 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 COQ4Q9Y3A0 265 aa15.51■□□□□ 0.07
SHMT1P1-201ENST00000419974 A0A1W2PQJ5 194 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 CHRNA1P02708 482 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 C1orf220Q5T0J3 134 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 NOTUMQ6P988 496 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 CBWD2Q8IUF1 395 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 BRSK2Q8IWQ3 736 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 DHX38Q92620 1227 aaKnown RBP15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 OSMRQ99650 979 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 TTYH3Q9C0H2 523 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 CDT1Q9H211 546 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 CDHR5Q9HBB8 845 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 EVPLQ92817 2033 aa15.5■□□□□ 0.07
SHMT1P1-201ENST00000419974 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 B4GALT5O43286 388 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 SLC27A1Q6PCB7 646 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 C15orf39Q6ZRI6 1047 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 CREBRFQ8IUR6 639 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 CD302Q8IX05 232 aa15.49■□□□□ 0.07
SHMT1P1-201ENST00000419974 FAM126BQ8IXS8 530 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms