RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ZKSCAN2Q63HK3 967 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 SYCE2Q6PIF2 218 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 Q6YL49 198 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 HDGFL2Q7Z4V5 671 aaPredicted RBP4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 RASSF3Q86WH2 238 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 OR52N2Q8NGI0 321 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 ATL2Q8NHH9 583 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 HIST1H2AHQ96KK5 128 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 HIST1H2AJQ99878 128 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 CPPED1Q9BRF8 314 aaPredicted RBP4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 CPEB1Q9BZB8 566 aaKnown RBP4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 POFUT1Q9H488 388 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 PRDM13Q9H4Q3 707 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 KDM1AO60341 852 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 NRP2O60462 931 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 LPXNO60711 386 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 CFBP00751 764 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 ZNF37AP17032 561 aaPredicted RBP4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 XPAP23025 273 aaPredicted RBP4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 BROXQ5VW32 411 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 IQSEC1Q6DN90 963 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 UNQ6494/PRO21346Q6UXR6 183 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 LCORLQ8N3X6 602 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 AFAP1L2Q8N4X5 818 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 ZCRB1Q8TBF4 217 aaKnown RBP4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 RSAD2Q8WXG1 361 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 PDCD2LQ9BRP1 358 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 SLC46A2Q9BY10 475 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 SERHL2Q9H4I8 314 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 MTG2Q9H4K7 406 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.5□□□□□ -1.69
SDCBPP3-201ENST00000419629 TMEM200CA6NKL6 621 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 OPHN1O60890 802 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 FSBPO95073 299 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 GAAP10253 952 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 AVPR1BP47901 424 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 KRTAP10-11P60412 298 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 STAT4Q14765 748 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 ERCC6LQ2NKX8 1250 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 CCDC178Q5BJE1 867 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 RNF219Q5W0B1 726 aaPredicted RBP4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 SPATS2Q86XZ4 545 aaKnown RBP4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 LILRA3Q8N6C8 439 aaPredicted RBP4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 GLB1L3Q8NCI6 653 aaPredicted RBP4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 OR5M3Q8NGP4 307 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 PPP1R14CQ8TAE6 165 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 ACAP3Q96P50 834 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 NDC1Q9BTX1 674 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 WDR11Q9BZH6 1224 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 R3HDMLQ9H3Y0 253 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 SYBUQ9NX95 663 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 SBNO2Q9Y2G9 1366 aa4.49□□□□□ -1.69
SDCBPP3-201ENST00000419629 MYPNQ86TC9 1320 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 PCDH8O95206 1070 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 GPR15P49685 360 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 NRG3P56975 720 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 TMPRSS15P98073 1019 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 VPS72Q15906 364 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 STRA8Q7Z7C7 330 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 ARHGEF19Q8IW93 802 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 CDYL2Q8N8U2 506 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 WDR66Q8TBY9 1149 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 CAVIN3Q969G5 261 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 ZNF496Q96IT1 587 aaPredicted RBP4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 LSM14BQ9BX40 385 aaKnown RBP4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 ANKFY1Q9P2R3 1169 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 DKK2Q9UBU2 259 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 PCDHB6Q9Y5E3 794 aa4.48□□□□□ -1.69
SDCBPP3-201ENST00000419629 INO80B-WBP1J3KQ70 363 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 GPR39O43194 453 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 ALDH1A2O94788 518 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 CDK4P11802 303 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 APOBEC3AP31941 199 aaPredicted RBP4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 CASRP41180 1078 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 CCDC62Q6P9F0 684 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 FAM83AQ86UY5 434 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 PIK3C3Q8NEB9 887 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 PAWRQ96IZ0 340 aaKnown RBP4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 INO80BQ9C086 356 aaPredicted RBP4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 RSAD1Q9HA92 442 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 TRPM5Q9NZQ8 1165 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 CHST2Q9Y4C5 530 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 EPN1Q9Y6I3 576 aaPredicted RBP4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 NUMBLQ9Y6R0 609 aa4.47□□□□□ -1.69
SDCBPP3-201ENST00000419629 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.69
SDCBPP3-201ENST00000419629 COL11A2P13942 1736 aaPredicted RBP4.46□□□□□ -1.69
SDCBPP3-201ENST00000419629 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 RNASET2O00584 256 aaKnown RBP4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 NCR1O76036 304 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 TYRP1P17643 537 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 IBSPP21815 317 aaPredicted RBP4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 ID4P47928 161 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 MANFP55145 182 aaKnown RBP4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 MXRA7P84157 204 aa4.46□□□□□ -1.7
SDCBPP3-201ENST00000419629 LMBR1LQ6UX01 489 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms