RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ADPGKQ9BRR6 497 aa22.37■■□□□ 1.17
GTF3A-202ENST00000419181 TMEM175Q9BSA9 504 aa22.37■■□□□ 1.17
GTF3A-202ENST00000419181 TMEM134Q9H6X4 195 aa22.37■■□□□ 1.17
GTF3A-202ENST00000419181 NGRNQ9NPE2 291 aaKnown RBP22.37■■□□□ 1.17
GTF3A-202ENST00000419181 ENTPD7Q9NQZ7 604 aa22.37■■□□□ 1.17
GTF3A-202ENST00000419181 MIOSQ9NXC5 875 aa22.37■■□□□ 1.17
GTF3A-202ENST00000419181 DAXXQ9UER7 740 aaPredicted RBP22.37■■□□□ 1.17
GTF3A-202ENST00000419181 RBM19Q9Y4C8 960 aaKnown RBP22.37■■□□□ 1.17
GTF3A-202ENST00000419181 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 LINC01565O15544 149 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 SCNN1GP51170 649 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 DSC1Q08554 894 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 ATF7IP2Q5U623 682 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 PLPP4Q5VZY2 271 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 GPBP1Q86WP2 473 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 COLGALT2Q8IYK4 626 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 FAM193BQ96PV7 902 aaPredicted RBP22.36■■□□□ 1.17
GTF3A-202ENST00000419181 TLE6Q9H808 572 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 KCNG1Q9UIX4 513 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 ODF2LQ9ULJ1 636 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 TNFSF13BQ9Y275 285 aa22.36■■□□□ 1.17
GTF3A-202ENST00000419181 SLC16A4O15374 487 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 TBX10O75333 385 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 CACNB1Q02641 598 aaPredicted RBP22.35■■□□□ 1.17
GTF3A-202ENST00000419181 DLX2Q07687 328 aaPredicted RBP22.35■■□□□ 1.17
GTF3A-202ENST00000419181 MCM6Q14566 821 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 DUSP6Q16828 381 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 DCAF4L1Q3SXM0 396 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 TMC7Q7Z402 723 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 DDX53Q86TM3 631 aaKnown RBP22.35■■□□□ 1.17
GTF3A-202ENST00000419181 LARP4BQ92615 738 aaKnown RBP22.35■■□□□ 1.17
GTF3A-202ENST00000419181 REEP2Q9BRK0 252 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 PARP2Q9UGN5 583 aa22.35■■□□□ 1.17
GTF3A-202ENST00000419181 HIDE1A8MVS5 230 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 PER2O15055 1255 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 ZSCAN22P10073 491 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 DHX8Q14562 1220 aaKnown RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 KRI1Q8N9T8 703 aaKnown RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 LINC00301Q8NCQ3 95 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 TMEM161BQ8NDZ6 487 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 ZNF396Q96N95 335 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 CDCA3Q99618 268 aaPredicted RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 ACO2Q99798 780 aaKnown RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 VN1R3Q9BXE9 311 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 MRPL4Q9BYD3 311 aaKnown RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 ZBP1Q9H171 429 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 SNTG2Q9NY99 539 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 KLK14Q9P0G3 267 aa22.34■■□□□ 1.17
GTF3A-202ENST00000419181 LARSQ9P2J5 1176 aaKnown RBP22.34■■□□□ 1.17
GTF3A-202ENST00000419181 FSD2A1L4K1 749 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 NRP1O14786 923 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 RECQL4O94761 1208 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 GLP2RO95838 553 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 ALDH2P05091 517 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 DDIT3P35638 169 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 SMTNP53814 917 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 GRIK3Q13003 919 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 SMC1AQ14683 1233 aaKnown RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 PUS10Q3MIT2 529 aaKnown RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 FOXD4L5Q5VV16 416 aaPredicted RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 PTCRAQ6ISU1 281 aaPredicted RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 VPS52Q8N1B4 723 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 MRPL43Q8N983 215 aaKnown RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 SPRYD3Q8NCJ5 442 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 FOXD4L4Q8WXT5 416 aaPredicted RBP22.33■■□□□ 1.17
GTF3A-202ENST00000419181 PTPRHQ9HD43 1115 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 STK17AQ9UEE5 414 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 CCDC39Q9UFE4 941 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 FAN1Q9Y2M0 1017 aa22.33■■□□□ 1.17
GTF3A-202ENST00000419181 C2orf71A6NGG8 1288 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 F13A1P00488 732 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 MAPTP10636 758 aaKnown RBP22.32■■□□□ 1.16
GTF3A-202ENST00000419181 TXLNAP40222 546 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 NDUFV1P49821 464 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 ZNF131P52739 623 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 PKP1Q13835 747 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 GIT2Q14161 759 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 STK38Q15208 465 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 APBB1IPQ7Z5R6 666 aaPredicted RBP22.32■■□□□ 1.16
GTF3A-202ENST00000419181 KCNN1Q92952 543 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 RPS6KC1Q96S38 1066 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 TARS2Q9BW92 718 aaKnown RBP22.32■■□□□ 1.16
GTF3A-202ENST00000419181 MARCH5Q9NX47 278 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 CLEC1BQ9P126 229 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 STK39Q9UEW8 545 aa22.32■■□□□ 1.16
GTF3A-202ENST00000419181 GRXCR2A6NFK2 248 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 CTSAP10619 480 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 PROZP22891 400 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 OR1G1P47890 313 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 NCKAP1LP55160 1127 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 KCNC3Q14003 757 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 ZNF568Q3ZCX4 644 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 VN1R2Q8NFZ6 395 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 MSLNLQ96KJ4 702 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 CDT1Q9H211 546 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 TFIP11Q9UBB9 837 aaKnown RBP22.31■■□□□ 1.16
GTF3A-202ENST00000419181 PRG3Q9Y2Y8 225 aaPredicted RBP22.31■■□□□ 1.16
GTF3A-202ENST00000419181 IRAK3Q9Y616 596 aa22.31■■□□□ 1.16
GTF3A-202ENST00000419181 ABLIM1O14639 778 aa22.3■■□□□ 1.16
GTF3A-202ENST00000419181 PTGESO14684 152 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms