RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RIOX2Q8IUF8 465 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 FGBP02675 491 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 KLRC1P26715 233 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 SMARCA1P28370 1054 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 PCNX4Q63HM2 1172 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 CLMNQ96JQ2 1002 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 SH2D3AQ9BRG2 576 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 RSPH14Q9UHP6 348 aa18.09■□□□□ 0.49
SYNGAP1-202ENST00000418600 LMNB2Q03252 620 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 CFAP221Q4G0U5 840 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 PASD1Q8IV76 773 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 CBX8Q9HC52 389 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 TYW1Q9NV66 732 aaKnown RBP18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 DSEQ9UL01 958 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 SULT1E1P49888 294 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 KNOP1Q1ED39 458 aaKnown RBP18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 SH3KBP1Q96B97 665 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 THAP9Q9H5L6 903 aa18.08■□□□□ 0.49
SYNGAP1-202ENST00000418600 SRGAP2O75044 1071 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 RWDD2AQ9UIY3 292 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 CCNE1P24864 410 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 RAPH1Q70E73 1250 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 SKA1Q96BD8 255 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 PSMB7Q99436 277 aa18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 ZMYND8Q9ULU4 1186 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-202ENST00000418600 KCNK3O14649 394 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 GNA15P30679 374 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 RPL10AP62906 217 aaKnown RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 STN1Q9H668 368 aaKnown RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 PLEKHA5Q9HAU0 1116 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ATF2P15336 505 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 CLCN3P51790 818 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ANO4Q32M45 955 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 WDR72Q3MJ13 1102 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 FAM76AQ8TAV0 307 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ANKEF1Q9NU02 776 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 KRT39Q6A163 491 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 ARMC6Q6NXE6 501 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 YIPF2Q9BWQ6 316 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 UNC45AQ9H3U1 944 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 KCND2Q9NZV8 630 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 GADD45BO75293 160 aaPredicted RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 CLTAP09496 248 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 PKN2Q16513 984 aaKnown RBP18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 FAM133AQ8N9E0 248 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 RAB17Q9H0T7 212 aa18.07■□□□□ 0.48
SYNGAP1-202ENST00000418600 LRRD1A4D1F6 860 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 RPS6KA2Q15349 733 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 DFFAO00273 331 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 THP07101 528 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 STILQ15468 1287 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 SGMS1Q86VZ5 419 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 L3MBTL3Q96JM7 780 aaPredicted RBP18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 B3GAT3O94766 335 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 PAMP19021 973 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 SCP2P22307 547 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 HDXQ7Z353 690 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 I3L4J1 428 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 TGFB3P10600 412 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 SATB1Q01826 763 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 CXCL17Q6UXB2 119 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 CPP00450 1065 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 ACOT2P49753 483 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 STARD3Q14849 445 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 CEP68Q76N32 757 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 CYP4F11Q9HBI6 524 aa18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
SYNGAP1-202ENST00000418600 RFX5P48382 616 aaPredicted RBP18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 BBOF1Q8ND07 529 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 ACSF2Q96CM8 615 aaPredicted RBP18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 OSMRQ99650 979 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 VCX3BQ9H321 246 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 CKMP06732 381 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 SOX10P56693 466 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 LMBRD2Q68DH5 695 aaPredicted RBP18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 HDAC11Q96DB2 347 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 HIPK3Q9H422 1215 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 MRPL17Q9NRX2 175 aaKnown RBP18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 BTBD19C9JJ37 291 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 SLC26A4O43511 780 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 INHAP05111 366 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 RHOXF2BP0C7M4 288 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 ARHGAP24Q8N264 748 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 CPB2Q96IY4 423 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 RHOXF2Q9BQY4 288 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 VPS41P49754 854 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 EVA1BQ9NVM1 165 aa18.05■□□□□ 0.48
SYNGAP1-202ENST00000418600 ADAM22Q9P0K1 906 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms