RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 H3BQ06 376 aaPredicted RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 PTGESO14684 152 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 SLC16A4O15374 487 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 NCK2O43639 380 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 NRIP1P48552 1158 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 ALDH7A1P49419 539 aaKnown RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 ZNF131P52739 623 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 RBM10P98175 930 aaKnown RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 DMP1Q13316 513 aaPredicted RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 DUSP6Q16828 381 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 PDE12Q6L8Q7 609 aaKnown RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 DDX53Q86TM3 631 aaKnown RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 URGCPQ8TCY9 931 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 CALML4Q96GE6 196 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 ACO2Q99798 780 aaKnown RBP22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 REEP2Q9BRK0 252 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 APOL6Q9BWW8 343 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 ZBP1Q9H171 429 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 CLDND1Q9NY35 253 aa22.71■■□□□ 1.23
PKNOX1-202ENST00000418336 C2orf71A6NGG8 1288 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 NRP1O14786 923 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 PER2O15055 1255 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 MEFVO15553 781 aaPredicted RBP22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 SSBP05455 408 aaKnown RBP eCLIP22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 ZSCAN22P10073 491 aaPredicted RBP22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 MAPTP10636 758 aaKnown RBP22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 NCKAP1LP55160 1127 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 GIT2Q14161 759 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 PLPP4Q5VZY2 271 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 RBM23Q86U06 439 aaKnown RBP22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 CDK5RAP3Q96JB5 506 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 GBP3Q9H0R5 595 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 IGFLR1Q9H665 355 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 KMT5AQ9NQR1 393 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 KLK14Q9P0G3 267 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 ODF2LQ9ULJ1 636 aa22.7■■□□□ 1.22
PKNOX1-202ENST00000418336 BDP1A6H8Y1 2624 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 GRXCR2A6NFK2 248 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 CCDC169A6NNP5 214 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 K7ERI5 159 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 BRD1O95696 1058 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 F13A1P00488 732 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 LIG1P18858 919 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 DDIT3P35638 169 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 KRT17Q04695 432 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 RNASELQ05823 741 aaKnown RBP22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 ATF7IP2Q5U623 682 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 GPBP1Q86WP2 473 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 MRPL43Q8N983 215 aaKnown RBP22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 LARP4BQ92615 738 aaKnown RBP22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 TRIM6Q9C030 488 aaPredicted RBP22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 CDT1Q9H211 546 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 SNTG2Q9NY99 539 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 IRAK3Q9Y616 596 aa22.69■■□□□ 1.22
PKNOX1-202ENST00000418336 LILRB3O75022 631 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 RECQL4O94761 1208 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 IL9P15248 144 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 TMEM184AQ6ZMB5 413 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 CEP120Q8N960 986 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 KRI1Q8N9T8 703 aaKnown RBP22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 TMEM169Q96HH4 297 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 TARS2Q9BW92 718 aaKnown RBP22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 HAPLN2Q9GZV7 340 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 NGRNQ9NPE2 291 aaKnown RBP22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 TFIP11Q9UBB9 837 aaKnown RBP22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 PUF60Q9UHX1 559 aaKnown RBP22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 ZDHHC9Q9Y397 364 aa22.68■■□□□ 1.22
PKNOX1-202ENST00000418336 CARNS1A5YM72 827 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 CTSAP10619 480 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 DCAF4L1Q3SXM0 396 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 FOXD4L5Q5VV16 416 aaPredicted RBP22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 ALKAL1Q6UXT8 129 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 VPS52Q8N1B4 723 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 FOXD4L4Q8WXT5 416 aaPredicted RBP22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 UHRF1Q96T88 793 aaPredicted RBP22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 CDCA3Q99618 268 aaPredicted RBP22.67■■□□□ 1.22
PKNOX1-202ENST00000418336 PPP6R2O75170 966 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 ALDH2P05091 517 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 GRIK3Q13003 919 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 COASYQ13057 564 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 XKR4Q5GH76 650 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 AXDND1Q5T1B0 1012 aaPredicted RBP22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 PTCRAQ6ISU1 281 aaPredicted RBP22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 TAS1R1Q7RTX1 841 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 MICAL1Q8TDZ2 1067 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 AUTS2Q8WXX7 1259 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 PAAF1Q9BRP4 392 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 MRPL4Q9BYD3 311 aaKnown RBP22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 TLE6Q9H808 572 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 CD320Q9NPF0 282 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 ENTPD7Q9NQZ7 604 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 CACNG4Q9UBN1 327 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 PARP2Q9UGN5 583 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 BARX2Q9UMQ3 279 aaPredicted RBP22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 FAN1Q9Y2M0 1017 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 TRIP11Q15643 1979 aa22.66■■□□□ 1.22
PKNOX1-202ENST00000418336 YEATS4O95619 227 aa22.65■■□□□ 1.22
PKNOX1-202ENST00000418336 PDIA4P13667 645 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms