RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TUBB8Q3ZCM7 444 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 GKAP1Q5VSY0 366 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 MCTP2Q6DN12 878 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 RHOT2Q8IXI1 618 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 BICD1Q96G01 975 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 XPO6Q96QU8 1125 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 EHMT1Q9H9B1 1298 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 FZD1Q9UP38 647 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CHRNB2P17787 502 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 RASA3Q14644 834 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 KIF22Q14807 665 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 THOC1Q96FV9 657 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 INTS9Q9NV88 658 aaKnown RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 GRHL1Q9NZI5 618 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 CTDP1Q9Y5B0 961 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-202ENST00000418310 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
LIMK1-202ENST00000418310 O00370 1275 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 PPFIA2O75334 1257 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 CDR1P51861 262 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 SLC15A2Q16348 729 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 SNRNP35Q16560 246 aaKnown RBP12.77□□□□□ -0.36
LIMK1-202ENST00000418310 RNF207Q6ZRF8 634 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 LRRC34Q8IZ02 419 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 SLC40A1Q9NP59 571 aa12.77□□□□□ -0.36
LIMK1-202ENST00000418310 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.36
LIMK1-202ENST00000418310 SYNGAP1Q96PV0 1343 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 DENND3A2RUS2 1198 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
LIMK1-202ENST00000418310 HSPA1LP34931 641 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-202ENST00000418310 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 POMGNT1Q8WZA1 660 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 ENTPD3O75355 529 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 QARSP47897 775 aaKnown RBP12.77□□□□□ -0.37
LIMK1-202ENST00000418310 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.37
LIMK1-202ENST00000418310 FMO1Q01740 532 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 FAM182AQ5T1J6 154 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 RANBP17Q9H2T7 1088 aaKnown RBP12.77□□□□□ -0.37
LIMK1-202ENST00000418310 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
LIMK1-202ENST00000418310 SLC26A4O43511 780 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 PLS3P13797 630 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 PTGIRP43119 386 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 PDE6CP51160 858 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 BYSLQ13895 437 aaKnown RBP12.76□□□□□ -0.37
LIMK1-202ENST00000418310 TKFCQ3LXA3 575 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CNPY4Q8N129 248 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 TAB3Q8N5C8 712 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-202ENST00000418310 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CHMP6Q96FZ7 201 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 LY75O60449 1722 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 RTN2O75298 545 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CYP11B1P15538 503 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CHKAP35790 457 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 KRT17Q04695 432 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 MTM1Q13496 603 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
LIMK1-202ENST00000418310 FAM213AQ9BRX8 229 aa12.76□□□□□ -0.37
LIMK1-202ENST00000418310 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ANXA13P27216 316 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 ADSSP30520 456 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 SEZ6Q53EL9 994 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 PAIP2Q9BPZ3 127 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 TMEM206Q9H813 350 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 FSBPO95073 299 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 DRD4P21917 467 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 CNGA1P29973 690 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 MAPK4P31152 587 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 CHRNA3P32297 505 aa12.75□□□□□ -0.37
LIMK1-202ENST00000418310 RPS6P62753 249 aaKnown RBP12.75□□□□□ -0.37
LIMK1-202ENST00000418310 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms