RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 WHAMMP3Q1A5X7 153 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
SSBP3-205ENST00000417664 ENOSF1Q7L5Y1 443 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 CEP112Q8N8E3 955 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 NOX5Q96PH1 765 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 MSTO1Q9BUK6 570 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 GPR88Q9GZN0 384 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 RNPEPQ9H4A4 650 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 RAB20Q9NX57 234 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 NAGPAQ9UK23 515 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 JRKLQ9Y4A0 524 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 PASKQ96RG2 1323 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 MACROD2A1Z1Q3 448 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 INSRRP14616 1297 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 SMPD1P17405 629 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 TMOD1P28289 359 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 MFAP3P55082 362 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
SSBP3-205ENST00000417664 GRM1Q13255 1194 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 DGKDQ16760 1214 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 ALKBH5Q6P6C2 394 aaKnown RBP18.17■□□□□ 0.5
SSBP3-205ENST00000417664 C15orf39Q6ZRI6 1047 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 SV2AQ7L0J3 742 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 NT5C1BQ96P26 610 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 C16orf70Q9BSU1 422 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 DUSP10Q9Y6W6 482 aa18.17■□□□□ 0.5
SSBP3-205ENST00000417664 H3BRB1 525 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 PRKCBP05771 671 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 DLATP10515 647 aaKnown RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 AP3M2P53677 418 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 PTENP60484 403 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 AMPD2Q01433 879 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 NCBP1Q09161 790 aaKnown RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 IFNLR1Q8IU57 520 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 RHPN2Q8IUC4 686 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 SOCS4Q8WXH5 440 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 ACO2Q99798 780 aaKnown RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 CARD6Q9BX69 1037 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 FZD8Q9H461 694 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 TUT1Q9H6E5 874 aaKnown RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 RBAKQ9NYW8 714 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 ZHX1Q9UKY1 873 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-205ENST00000417664 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 TFR2Q9UP52 801 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 TLL2Q9Y6L7 1015 aa18.16■□□□□ 0.5
SSBP3-205ENST00000417664 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ACKR2O00590 384 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 MMP3P08254 477 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■■□□ 14.6
SSBP3-205ENST00000417664 NLRP11P59045 1033 aaKnown RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 TNFAIP2Q03169 654 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 IFI16Q16666 785 aaKnown RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 SMYD5Q6GMV2 418 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 CRELD2Q6UXH1 353 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 MTERF4Q7Z6M4 381 aaKnown RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 METTL13Q8N6R0 699 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ANKRD7Q92527 254 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 USP6NLQ92738 828 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 FOXN3O00409 490 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 TADA3O75528 432 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 PRLRP16471 622 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 KLRC1P26715 233 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 GCNT1Q02742 428 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 MCL1Q07820 350 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 SURF1Q15526 300 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 FAM187BQ17R55 369 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ARHGAP44Q17R89 818 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ZACNQ401N2 412 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 TSHZ1Q6ZSZ6 1077 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 GPIHBP1Q8IV16 184 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ARHGEF19Q8IW93 802 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 SLC30A5Q8TAD4 765 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 UBXN4Q92575 508 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 HHIPL1Q96JK4 782 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ZBTB45Q96K62 511 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 POP1Q99575 1024 aaKnown RBP18.15■□□□□ 0.5
SSBP3-205ENST00000417664 SYT11Q9BT88 431 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 HAPLN2Q9GZV7 340 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 ANKFY1Q9P2R3 1169 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 SAR1BQ9Y6B6 198 aa18.15■□□□□ 0.5
SSBP3-205ENST00000417664 A0A0A6YYK5 440 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-205ENST00000417664 OGTO15294 1046 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 TNNI1P19237 187 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 RGS2P41220 211 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 PHKA2P46019 1235 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 ACOT2P49753 483 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 SRGAP1Q7Z6B7 1085 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 FAM71AQ8IYT1 594 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 TAS1R2Q8TE23 839 aa18.14■□□□□ 0.49
SSBP3-205ENST00000417664 TRAPPC12Q8WVT3 735 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms