RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ITGA4P13612 1032 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 NR2F2P24468 414 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 OSTNP61366 133 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
TRIM48-201ENST00000417545 LRRC63Q05C16 580 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 KCNA1Q09470 495 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 KYAT1Q16773 422 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 CCDC40Q4G0X9 1142 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 ANO6Q4KMQ2 910 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 CEP135Q66GS9 1140 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 ASTLQ6HA08 431 aaPredicted RBP9.24□□□□□ -0.93
TRIM48-201ENST00000417545 TRAF7Q6Q0C0 670 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 OTOP2Q7RTS6 562 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 THNSL1Q8IYQ7 743 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 RPS6KC1Q96S38 1066 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 DNAJC25Q9H1X3 360 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 AGPAT3Q9NRZ7 376 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 FAM105AQ9NUU6 356 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 MAGEC2Q9UBF1 373 aaPredicted RBP9.24□□□□□ -0.93
TRIM48-201ENST00000417545 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 PCDHB7Q9Y5E2 793 aa9.24□□□□□ -0.93
TRIM48-201ENST00000417545 ZMYM2Q9UBW7 1377 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 DNAH12Q6ZR08 3092 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 A0A1B0GUA9 196 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 SMTNL1A8MU46 457 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ANKRD63C9JTQ0 380 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 GOLGA6L19H0YKK7 550 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 OGTO15294 1046 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 NR3C1P04150 777 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 TPM2P07951 284 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 C7P10643 843 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 EPB41P11171 864 aaKnown RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 KRT13P13646 458 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 GARTP22102 1010 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ITGB8P26012 769 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 AMHR2Q16671 573 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 EDRF1Q3B7T1 1238 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 EEF1DP3Q658K8 133 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 SLC24A5Q71RS6 500 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 USP37Q86T82 979 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 FAM114A1Q8IWE2 563 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 GPD1LQ8N335 351 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 CSGALNACT2Q8N6G5 542 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 XXYLT1Q8NBI6 393 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ANKRD20A12PQ8NF67 263 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 SLC39A7Q92504 469 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 FAM212AQ96EL1 285 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 SAAL1Q96ER3 474 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 MS4A3Q96HJ5 214 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ZBTB45Q96K62 511 aaPredicted RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 FAM213AQ9BRX8 229 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 ZBED2Q9BTP6 218 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 STRA6Q9BX79 667 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 CDT1Q9H211 546 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 RPF1Q9H9Y2 349 aaKnown RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 KIAA1586Q9HCI6 787 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 TOPORSQ9NS56 1045 aaPredicted RBP9.23□□□□□ -0.93
TRIM48-201ENST00000417545 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 RWDD2AQ9UIY3 292 aa9.23□□□□□ -0.93
TRIM48-201ENST00000417545 GOLGA8IPA6NC78 632 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 GOLGA8JA6NMD2 632 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 TISP43B9A030 160 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 HOXA2O43364 376 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 UPP2O95045 317 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 CAVIN2O95810 425 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 ERCC5P28715 1186 aaPredicted RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 MAGEA10P43363 369 aaPredicted RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 FKBP3Q00688 224 aaKnown RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 PPP2R3AQ06190 1150 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 MCL1Q07820 350 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 ADAM9Q13443 819 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 ZNF365Q70YC5 407 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 RDH13Q8NBN7 331 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 URGCPQ8TCY9 931 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 KCNN1Q92952 543 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 RNPC3Q96LT9 517 aaKnown RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 ACAP3Q96P50 834 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 FNBP1Q96RU3 617 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 CBWD1Q9BRT8 395 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 EIF2AQ9BY44 585 aaKnown RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 OSBPL7Q9BZF2 842 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 KCTD10Q9H3F6 313 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 NXF3Q9H4D5 531 aaKnown RBP9.22□□□□□ -0.93
TRIM48-201ENST00000417545 TRAF3IP3Q9Y228 551 aa9.22□□□□□ -0.93
TRIM48-201ENST00000417545 R3HCC1Q9Y3T6 440 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms