RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 SLC6A17Q9H1V8 727 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 BICC1Q9H694 974 aaKnown RBP5.52□□□□□ -1.53
PTPRK-210ENST00000415055 EPHX3Q9H6B9 360 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 SP110Q9HB58 689 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 NCOA5Q9HCD5 579 aaKnown RBP5.52□□□□□ -1.53
PTPRK-210ENST00000415055 FLRT1Q9NZU1 646 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 MAGEC2Q9UBF1 373 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-210ENST00000415055 RBPJLQ9UBG7 517 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 MSRAQ9UJ68 235 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 XIRP2A4UGR9 3374 aa5.52□□□□□ -1.53
PTPRK-210ENST00000415055 LRRC37A2A6NM11 1700 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 MCM3APO60318 1980 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 MYH1P12882 1939 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 FITM1A5D6W6 292 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 SLC15A5A6NIM6 579 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 C9IYK1 514 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 CLEC3AO75596 197 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 PARNO95453 639 aaKnown RBP5.51□□□□□ -1.53
PTPRK-210ENST00000415055 INHBBP09529 407 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 MYCLP1P12525 358 aaPredicted RBP5.51□□□□□ -1.53
PTPRK-210ENST00000415055 ITGB8P26012 769 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 MRE11P49959 708 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 KCNQ1P51787 676 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 SV2CQ496J9 727 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 PPM1KQ8N3J5 372 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 TRPV1Q8NER1 839 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 CCDC140Q96MF4 163 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 AARSD1Q9BTE6 412 aaKnown RBP5.51□□□□□ -1.53
PTPRK-210ENST00000415055 DENND2AQ9ULE3 1009 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 MRPS23Q9Y3D9 190 aaKnown RBP5.51□□□□□ -1.53
PTPRK-210ENST00000415055 RIF1Q5UIP0 2472 aaKnown RBP5.51□□□□□ -1.53
PTPRK-210ENST00000415055 CACNA1BQ00975 2339 aa5.51□□□□□ -1.53
PTPRK-210ENST00000415055 A0A087X0B3 334 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 TRBV23-1A0A0A0MS06 115 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 A0A1W2PQU0 124 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 EFCAB14O75071 495 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 LRRN2O75325 713 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 HOXA7P31268 230 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 RNF4P78317 190 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 LRRC41Q15345 812 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 NR0B2Q15466 257 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 ATP2B3Q16720 1220 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 TRIM61Q5EBN2 209 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 PRAMEF19Q5SWL8 479 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 HEATR6Q6AI08 1181 aaKnown RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 WWC2Q6AWC2 1192 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 CCDC174Q6PII3 467 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 ZGPATQ8N5A5 531 aaKnown RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 NPLOC4Q8TAT6 608 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 LPIN2Q92539 896 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 RCC1LQ96I51 464 aaKnown RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 KREMEN1Q96MU8 473 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 MKRN2Q9H000 416 aaKnown RBP5.5□□□□□ -1.53
PTPRK-210ENST00000415055 SIL1Q9H173 461 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 SLC28A3Q9HAS3 691 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 FAN1Q9Y2M0 1017 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 PCDHA11Q9Y5I1 949 aa5.5□□□□□ -1.53
PTPRK-210ENST00000415055 KIF16BQ96L93 1317 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 TRIOO75962 3097 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 CFAP54Q96N23 3096 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 ZFHX2Q9C0A1 2572 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 C19orf81C9J6K1 198 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 SMIM22K7EJ46 135 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 KIAA0355O15063 1070 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 SEPT4O43236 478 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 PPM1BO75688 479 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 ALDH1L1O75891 902 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 CAPNS1P04632 268 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 ASNSP08243 561 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 NBPF7P0C2Y1 421 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 CYBAP13498 195 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 POU3F2P20265 443 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 FGFR2P21802 821 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 PHKA1P46020 1223 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 PPIGQ13427 754 aaKnown RBP eCLIP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 PLS1Q14651 629 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 RRP1BQ14684 758 aaKnown RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 SNX17Q15036 470 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 RAB30Q15771 203 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 AXDND1Q5T1B0 1012 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 SPTY2D1Q68D10 685 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 RNF180Q86T96 592 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 SPPL2CQ8IUH8 684 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 TEX11Q8IYF3 940 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 BVESQ8NE79 360 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 RNF141Q8WVD5 230 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 HAUS7Q99871 368 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 NOL10Q9BSC4 688 aaKnown RBP5.49□□□□□ -1.53
PTPRK-210ENST00000415055 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 ARHGEF4Q9NR80 690 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 WHRNQ9P202 907 aa5.49□□□□□ -1.53
PTPRK-210ENST00000415055 LRP2BPQ9P2M1 347 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms