RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 IQCDQ96DY2 449 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ZBTB45Q96K62 511 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 MFSD14AQ96MC6 490 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ZNF830Q96NB3 372 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 OSMRQ99650 979 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FAM213AQ9BRX8 229 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TSEN34Q9BSV6 310 aaKnown RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 MSTO1Q9BUK6 570 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 UNC93B1Q9H1C4 597 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 PDZD7Q9H5P4 517 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 KIAA1586Q9HCI6 787 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 PTPRHQ9HD43 1115 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 PAK6Q9NQU5 681 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 PLSCR2Q9NRY7 297 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 AGO2Q9UKV8 859 aaKnown RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 TNFSF13BQ9Y275 285 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ZKSCAN5Q9Y2L8 839 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 GRIN2DO15399 1336 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 KAT6AQ92794 2004 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CENPFP49454 3210 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 A0A1W2PQ45 241 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 A0A1W2PQJ5 194 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 A0A1W2PQY0 241 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 TTC26A0AVF1 554 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ZNF233A6NK53 670 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 LRRIQ3A6PVS8 624 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 EPHB6O15197 1021 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CLDN3O15551 220 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 N4BP1O75113 896 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 CSDE1O75534 798 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 ERLIN2O94905 339 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 LDHAP00338 332 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 HARSP12081 509 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 DARSP14868 501 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 ARF4P18085 180 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 MATR3P43243 847 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS41-204ENST00000413141 ACOT2P49753 483 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 MXI1P50539 228 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ADKP55263 362 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 WNT7BP56706 349 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PTPN11Q06124 597 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 PPP3CAQ08209 521 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ITGA7Q13683 1181 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PSMD6Q15008 389 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PCBP1Q15365 356 aaKnown RBP eCLIP7.23□□□□□ -1.25
VPS41-204ENST00000413141 TMEM132AQ24JP5 1023 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 SLC9C1Q4G0N8 1177 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CBWD6Q4V339 395 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CBWD3Q5JTY5 395 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CBWD5Q5RIA9 395 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ZBTB41Q5SVQ8 909 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 EEF1DP3Q658K8 133 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CRELD2Q6UXH1 353 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 ZBTB33Q86T24 672 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 USP37Q86T82 979 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ZSCAN30Q86W11 494 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 TMEM139Q8IV31 216 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 ZNF710Q8N1W2 664 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 NME8Q8N427 588 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CCDC112Q8NEF3 446 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 TMC2Q8TDI7 906 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PARD3BQ8TEW8 1205 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 TMEM40Q8WWA1 233 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 WNT8BQ93098 351 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 GLT1D1Q96MS3 346 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PANX2Q96RD6 677 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CRACR2AQ9BSW2 395 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 NUP58Q9BVL2 599 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 LSM14BQ9BX40 385 aaKnown RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 GCOM2Q9BZD3 368 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 CDT1Q9H211 546 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 GANQ9H2C0 597 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 MMRN2Q9H8L6 949 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 FAM207AQ9NSI2 230 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 ABHD10Q9NUJ1 306 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 RBAKQ9NYW8 714 aaPredicted RBP7.23□□□□□ -1.25
VPS41-204ENST00000413141 GCNT4Q9P109 453 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 CAPN11Q9UMQ6 739 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 GINS2Q9Y248 185 aa7.23□□□□□ -1.25
VPS41-204ENST00000413141 RALGAPA2Q2PPJ7 1873 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 A0A0U1RQG5 324 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 KBTBD13C9JR72 458 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 M0QZ92 97 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 RNF225M0QZC1 329 aaPredicted RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 DNM1LO00429 736 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 OGTO15294 1046 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 PMM2O15305 246 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 P4HA2O15460 535 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 STX10O60499 249 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 NOL4O94818 638 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 RPLP2P05387 115 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 DLATP10515 647 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 MCF2P10911 925 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 HSPA8P11142 646 aaKnown RBP7.22□□□□□ -1.25
VPS41-204ENST00000413141 CCL5P13501 91 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 FGFR4P22455 802 aa7.22□□□□□ -1.25
VPS41-204ENST00000413141 FECHP22830 423 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms