RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
TRIM56-202ENST00000412507 TAS1R3Q7RTX0 852 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 LARP4BQ92615 738 aaKnown RBP20.74■□□□□ 0.91
TRIM56-202ENST00000412507 TMEM169Q96HH4 297 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 ADPGKQ9BRR6 497 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 ENTPD7Q9NQZ7 604 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 RBM19Q9Y4C8 960 aaKnown RBP20.74■□□□□ 0.91
TRIM56-202ENST00000412507 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
TRIM56-202ENST00000412507 H3BQ06 376 aaPredicted RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 LINC01565O15544 149 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 NCK2O43639 380 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 PDIA4P13667 645 aaKnown RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 LTBRP36941 435 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 CTC1Q2NKJ3 1217 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 PDE12Q6L8Q7 609 aaKnown RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 TMC7Q7Z402 723 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 KRI1Q8N9T8 703 aaKnown RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 BCL7CQ8WUZ0 217 aaPredicted RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 IGSF21Q96ID5 467 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 TCF25Q9BQ70 676 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 REEP2Q9BRK0 252 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 NTPCRQ9BSD7 190 aaKnown RBP20.73■□□□□ 0.91
TRIM56-202ENST00000412507 SNTG2Q9NY99 539 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 CCDC39Q9UFE4 941 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 BDP1A6H8Y1 2624 aa20.73■□□□□ 0.91
TRIM56-202ENST00000412507 CARNS1A5YM72 827 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 SMTNP53814 917 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 ADAM15Q13444 863 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 GSTCDQ8NEC7 633 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.72■□□□□ 0.91
TRIM56-202ENST00000412507 ADAMTS19Q8TE59 1207 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 SPIRE2Q8WWL2 714 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 ACO2Q99798 780 aaKnown RBP20.72■□□□□ 0.91
TRIM56-202ENST00000412507 TMEM175Q9BSA9 504 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 TLE6Q9H808 572 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 ODF2LQ9ULJ1 636 aa20.72■□□□□ 0.91
TRIM56-202ENST00000412507 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 NRP1O14786 923 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 PER2O15055 1255 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 SPTLC2O15270 562 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 ALDH2P05091 517 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 KRT18P05783 430 aaKnown RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 DDIT3P35638 169 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 TXLNAP40222 546 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 DLX2Q07687 328 aaPredicted RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 GIT2Q14161 759 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 DCAF4L1Q3SXM0 396 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 LEXMQ3ZCV2 418 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 COLGALT2Q8IYK4 626 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 EFHBQ8N7U6 833 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 TMEM161BQ8NDZ6 487 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 TARS2Q9BW92 718 aaKnown RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 MRPL4Q9BYD3 311 aaKnown RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 NGRNQ9NPE2 291 aaKnown RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 LARSQ9P2J5 1176 aaKnown RBP20.71■□□□□ 0.91
TRIM56-202ENST00000412507 KCNG1Q9UIX4 513 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 TNFSF13BQ9Y275 285 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 FAN1Q9Y2M0 1017 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 ZMYM2Q9UBW7 1377 aa20.71■□□□□ 0.91
TRIM56-202ENST00000412507 RECQL4O94761 1208 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 FAM13AO94988 1023 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 OR1G1P47890 313 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 DSC1Q08554 894 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 RRAGBQ5VZM2 374 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 DDX53Q86TM3 631 aaKnown RBP20.7■□□□□ 0.9
TRIM56-202ENST00000412507 VPS52Q8N1B4 723 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 RPS6KC1Q96S38 1066 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 PANK2Q9BZ23 570 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 CXCL16Q9H2A7 254 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 STK17AQ9UEE5 414 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
TRIM56-202ENST00000412507 GDAQ9Y2T3 454 aa20.7■□□□□ 0.9
TRIM56-202ENST00000412507 PRG3Q9Y2Y8 225 aaPredicted RBP20.7■□□□□ 0.9
TRIM56-202ENST00000412507 MTCL1Q9Y4B5 1905 aaKnown RBP20.7■□□□□ 0.9
TRIM56-202ENST00000412507 PLXNA3P51805 1871 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 VWA8A3KMH1 1905 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 TBX10O75333 385 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 MAPTP10636 758 aaKnown RBP20.69■□□□□ 0.9
TRIM56-202ENST00000412507 CA8P35219 290 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 NCKAP1LP55160 1127 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 STRN3Q13033 797 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 SMC1AQ14683 1233 aaKnown RBP20.69■□□□□ 0.9
TRIM56-202ENST00000412507 CLUL1Q15846 466 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 DUSP6Q16828 381 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 ZBTB33Q86T24 672 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 MYCT1Q8N699 235 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 VN1R3Q9BXE9 311 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 ZBP1Q9H171 429 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 ZHX3Q9H4I2 956 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 PTPRHQ9HD43 1115 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 ANK1P16157 1881 aa20.69■□□□□ 0.9
TRIM56-202ENST00000412507 A0A087X0B3 334 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 PPP6R2O75170 966 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 YEATS4O95619 227 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 GLP2RO95838 553 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 NDUFV1P49821 464 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 ZNF131P52739 623 aa20.68■□□□□ 0.9
TRIM56-202ENST00000412507 RBM10P98175 930 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms