RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 GLIS3Q8NEA6 775 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 HPS3Q969F9 1004 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 ACO2Q99798 780 aaKnown RBP9.61□□□□□ -0.87
LINC02539-201ENST00000411615 FUCA2Q9BTY2 467 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 FTHL17Q9BXU8 183 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 FGFBP2Q9BYJ0 223 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 GBP3Q9H0R5 595 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 AGO3Q9H9G7 860 aaKnown RBP9.61□□□□□ -0.87
LINC02539-201ENST00000411615 TYW1Q9NV66 732 aaKnown RBP9.61□□□□□ -0.87
LINC02539-201ENST00000411615 PADI3Q9ULW8 664 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 ST3GAL5Q9UNP4 418 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 TRAF3IP3Q9Y228 551 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 GINS2Q9Y248 185 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 GDAQ9Y2T3 454 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 NR2E3Q9Y5X4 410 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 STYXL1Q9Y6J8 313 aa9.61□□□□□ -0.87
LINC02539-201ENST00000411615 UMODL1Q5DID0 1318 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 BICDL2A1A5D9 508 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 N4BP3O15049 544 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 RNF40O75150 1001 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 GHRP10912 638 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 SKIP12755 728 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 GARTP22102 1010 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 CCNE1P24864 410 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 ZNF445P59923 1031 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 POU5F1Q01860 360 aaKnown RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 LRRC63Q05C16 580 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 TYRO3Q06418 890 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 PAK2Q13177 524 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 DSC3Q14574 896 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 KYAT1Q16773 422 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 EDRF1Q3B7T1 1238 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 ZCWPW2Q504Y3 356 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 NOTUMQ6P988 496 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 HS2ST1Q7LGA3 356 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 C7orf61Q8IZ16 206 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 SYCP3Q8IZU3 236 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 SEPT8Q92599 483 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 DPF3Q92784 378 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 PPP1R16BQ96T49 567 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 IFIH1Q9BYX4 1025 aaKnown RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 NAT10Q9H0A0 1025 aaKnown RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 PTPRHQ9HD43 1115 aa9.6□□□□□ -0.87
LINC02539-201ENST00000411615 PRDM5Q9NQX1 630 aaPredicted RBP9.6□□□□□ -0.87
LINC02539-201ENST00000411615 A0A0B4J269 797 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ABHD14A-ACY1A0A1B0GW23 586 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 SYCE3A1L190 88 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ABLIM1O14639 778 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 HNRNPDLO14979 420 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 TGFB1I1O43294 461 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 CALUO43852 315 aaPredicted RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 EFCAB14O75071 495 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ZNF623O75123 536 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 CSDE1O75534 798 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ZSCAN20P17040 1043 aaPredicted RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ITGB8P26012 769 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 CD52P31358 61 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 LIG4P49917 911 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 CCL23P55773 120 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 FAM189BP81408 668 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 MCL1Q07820 350 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 KCNA1Q09470 495 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 NFX1Q12986 1120 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 PPIGQ13427 754 aaKnown RBP eCLIP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 DPCR1Q3MIW9 517 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 DCAF4L1Q3SXM0 396 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ATF7IP2Q5U623 682 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ISM2Q6H9L7 571 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 CNKSR3Q6P9H4 555 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 SLC27A1Q6PCB7 646 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 SMYD4Q8IYR2 804 aaPredicted RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 P2RX5Q93086 422 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 ADPGKQ9BRR6 497 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 TARS2Q9BW92 718 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 TMX1Q9H3N1 280 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 SEMA6BQ9H3T3 888 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 KIAA1586Q9HCI6 787 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 IL23AQ9NPF7 189 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 RGS18Q9NS28 235 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 RWDD2AQ9UIY3 292 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 TSR3Q9UJK0 312 aaKnown RBP9.59□□□□□ -0.87
LINC02539-201ENST00000411615 SCN5AQ14524 2016 aa9.59□□□□□ -0.87
LINC02539-201ENST00000411615 LTBP2Q14767 1821 aa9.59□□□□□ -0.88
LINC02539-201ENST00000411615 MAPK13O15264 365 aa9.58□□□□□ -0.88
LINC02539-201ENST00000411615 CLDN3O15551 220 aa9.58□□□□□ -0.88
LINC02539-201ENST00000411615 B4GALT5O43286 388 aa9.58□□□□□ -0.88
LINC02539-201ENST00000411615 BAIAP3O94812 1187 aa9.58□□□□□ -0.88
LINC02539-201ENST00000411615 FGFR1OPO95684 399 aaKnown RBP9.58□□□□□ -0.88
LINC02539-201ENST00000411615 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
LINC02539-201ENST00000411615 EDN1P05305 212 aa9.58□□□□□ -0.88
LINC02539-201ENST00000411615 MCF2P10911 925 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms