RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 TRMT1LQ7Z2T5 733 aaKnown RBP20.92■□□□□ 0.94
LMO2-203ENST00000411482 ZSWIM2Q8NEG5 633 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 PARD3BQ8TEW8 1205 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 ZNF333Q96JL9 665 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 FAM167AQ96KS9 214 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 NOX5Q96PH1 765 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 KIFC3Q9BVG8 833 aa20.92■□□□□ 0.94
LMO2-203ENST00000411482 CCDC172P0C7W6 258 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 POLGP54098 1239 aaPredicted RBP20.91■□□□□ 0.94
LMO2-203ENST00000411482 ARID5AQ03989 594 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 DRAP1Q14919 205 aaPredicted RBP20.91■□□□□ 0.94
LMO2-203ENST00000411482 CELF3Q5SZQ8 465 aaKnown RBP20.91■□□□□ 0.94
LMO2-203ENST00000411482 OLFML2BQ68BL8 750 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 PHLDB3Q6NSJ2 640 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 RPGRIP1Q96KN7 1286 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 TMEM117Q9H0C3 514 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 NAGPAQ9UK23 515 aa20.91■□□□□ 0.94
LMO2-203ENST00000411482 CTAGE15A4D2H0 777 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 MAFO75444 373 aaPredicted RBP20.9■□□□□ 0.94
LMO2-203ENST00000411482 ARIH2O95376 493 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 INHAP05111 366 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 CTAGE8P0CG41 777 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 GLRA2P23416 452 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 MTFR1Q15390 333 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 MAP3K21Q5TCX8 1036 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 PLPPR4Q7Z2D5 763 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 ZNF572Q7Z3I7 529 aaPredicted RBP20.9■□□□□ 0.94
LMO2-203ENST00000411482 CTAGE6Q86UF2 777 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 VPS36Q86VN1 386 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 CBWD2Q8IUF1 395 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 CTAGE4Q8IX94 777 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 ALS2CR12Q96Q35 445 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 GPR20Q99678 358 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 TMEM134Q9H6X4 195 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 KIAA1586Q9HCI6 787 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 HDAC6Q9UBN7 1215 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 SNX12Q9UMY4 172 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 PCDHGC5Q9Y5F6 944 aa20.9■□□□□ 0.94
LMO2-203ENST00000411482 ASB14A6NK59 587 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 ENC1O14682 589 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 EVI5O60447 810 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 MOCS3O95396 460 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 HMGCRP04035 888 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 CLDN10P78369 228 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 GPIHBP1Q8IV16 184 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 MSANTD4Q8NCY6 345 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 ASAP3Q8TDY4 903 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 SLC7A3Q8WY07 619 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.89■□□□□ 0.94
LMO2-203ENST00000411482 SLC5A4Q9NY91 659 aa20.89■□□□□ 0.94
LMO2-203ENST00000411482 MYH10P35580 1976 aa20.89■□□□□ 0.93
LMO2-203ENST00000411482 SIP14410 1827 aa20.89■□□□□ 0.93
LMO2-203ENST00000411482 DDX3XO00571 662 aaKnown RBP eCLIP20.88■□□□□ 0.933e-8■□□□□ 8.8
LMO2-203ENST00000411482 SORBS3O60504 671 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 ZSCAN20P17040 1043 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 CYP2C19P33261 490 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 TCF7P36402 384 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 GCLMP48507 274 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 MXI1P50539 228 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 ITIH3Q06033 890 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 CYP24A1Q07973 514 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 CACNB2Q08289 660 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 LY6KQ17RY6 165 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 KIAA0753Q2KHM9 967 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 ALKBH5Q6P6C2 394 aaKnown RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 MAMDC4Q6UXC1 1216 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 USP37Q86T82 979 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 EXOC8Q8IYI6 725 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 GPD1LQ8N335 351 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 BBXQ8WY36 941 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 TMEM8AQ9HCN3 771 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 A0A0A6YYK5 440 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 IGKV6-21A0A0C4DH24 114 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 GAS2O43903 313 aaKnown RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 KLRC1P26715 233 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 SLC26A2P50443 739 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 GPC3P51654 580 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 CKAP4Q07065 602 aaKnown RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 TEX35Q5T0J7 233 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 KRT39Q6A163 491 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 ZNF467Q7Z7K2 595 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 TINF2Q9BSI4 451 aa20.88■□□□□ 0.93
LMO2-203ENST00000411482 CCDC94Q9BW85 323 aaPredicted RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 PUF60Q9UHX1 559 aaKnown RBP20.88■□□□□ 0.93
LMO2-203ENST00000411482 GOLGA8IPA6NC78 632 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 GOLGA8JA6NMD2 632 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 LRRIQ3A6PVS8 624 aaPredicted RBP20.87■□□□□ 0.93
LMO2-203ENST00000411482 HNRNPDLO14979 420 aaKnown RBP20.87■□□□□ 0.93
LMO2-203ENST00000411482 SNAI1O95863 264 aaPredicted RBP20.87■□□□□ 0.93
LMO2-203ENST00000411482 TUBBP07437 444 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 TCP1P17987 556 aaKnown RBP20.87■□□□□ 0.93
LMO2-203ENST00000411482 TRPV1Q8NER1 839 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 POMGNT1Q8WZA1 660 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 TMEM143Q96AN5 459 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 SAAL1Q96ER3 474 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 TLR10Q9BXR5 811 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 ARGLU1Q9NWB6 273 aaPredicted RBP20.87■□□□□ 0.93
LMO2-203ENST00000411482 RAB21Q9UL25 225 aa20.87■□□□□ 0.93
LMO2-203ENST00000411482 FOXN3O00409 490 aaPredicted RBP20.86■□□□□ 0.93
LMO2-203ENST00000411482 EXTL3O43909 919 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms