RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 FRYLO94915 3013 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 DOCK8Q8NF50 2099 aa2.65□□□□□ -1.98
RNU4-53P-201ENST00000410828 FNDC1Q4ZHG4 1894 aaPredicted RBP2.65□□□□□ -1.98
RNU4-53P-201ENST00000410828 FANCMQ8IYD8 2048 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 IGLV3-22A0A075B6J6 115 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 IGKV6-21A0A0C4DH24 114 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARL5CA6NH57 179 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SRRM3A6NNA2 597 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHURC1-FNTBB4DL54 471 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SH2B2O14492 632 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 AXIN1O15169 862 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCL16O15467 120 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRC1O43663 620 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 GAS7O60861 476 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAFO75444 373 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TADA2AO75478 443 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ERLIN2O94905 339 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 KCNK5O95279 499 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PAPSS2O95340 614 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 C8AP07357 584 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 POU2F2P09086 479 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF806P0C7X5 589 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RPL17P18621 184 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RXRAP19793 462 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 HOXA6P31267 233 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 HOXA11P31270 313 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 CIITAP33076 1130 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MCM5P33992 734 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MLH1P40692 756 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 LIFRP42702 1097 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 FNTBP49356 437 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 CLK2P49760 499 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 NOVA1P51513 510 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MLLT6P55198 1093 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SATB1Q01826 763 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RING1Q06587 406 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 DSC1Q08554 894 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ELAVL2Q12926 359 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SRSF5Q13243 272 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 DRP2Q13474 957 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRRC32Q14392 662 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCBP1Q15365 356 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SF3A2Q15428 464 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MTERF2Q49AM1 385 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRR16Q569H4 304 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 UBXN11Q5T124 520 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 AXDND1Q5T1B0 1012 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 STPG1Q5TH74 334 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 JAKMIP3Q5VZ66 844 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF43Q68DV7 783 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 HEATR6Q6AI08 1181 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 WWC2Q6AWC2 1192 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TANGO2Q6ICL3 276 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TYW1BQ6NUM6 668 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 C1orf228Q6PIY5 440 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMTC3Q6ZXV5 915 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SRGAP1Q7Z6B7 1085 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PLEKHM2Q8IWE5 1019 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MB21D2Q8IYB1 491 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 EXOC8Q8IYI6 725 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 HACE1Q8IYU2 909 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM160A2Q8N612 972 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RDM1Q8NG50 284 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ITFG1Q8TB96 612 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC7A14Q8TBB6 771 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 DEPDC1BQ8WUY9 529 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RUFY2Q8WXA3 655 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 CRYGNQ8WXF5 182 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC7A3Q8WY07 619 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ING5Q8WYH8 240 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 PIK3R5Q8WYR1 880 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAP4K1Q92918 833 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 IRF7Q92985 503 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ELSPBP1Q96BH3 223 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MCRS1Q96EZ8 462 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 KIF12Q96FN5 646 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 MSANTD3Q96H12 275 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 LOXL4Q96JB6 756 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 B3GALT6Q96L58 329 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 NLRP4Q96MN2 994 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 GAD1Q99259 594 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RIT2Q99578 217 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TTPALQ9BTX7 342 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRMT61BQ9BVS5 477 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 APOL6Q9BWW8 343 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 LSM14BQ9BX40 385 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TEKT3Q9BXF9 490 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 NIFKQ9BYG3 293 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPR62Q9BZJ7 368 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 IL25Q9H293 177 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 IFT122Q9HBG6 1241 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZFP14Q9HCL3 533 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRPV5Q9NQA5 729 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 RBM28Q9NW13 759 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 BARHL2Q9NY43 387 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 DNMT3BQ9UBC3 853 aaKnown RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 SEPT9Q9UHD8 586 aaPredicted RBP2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 FBXW11Q9UKB1 542 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAM28Q9UKQ2 775 aa2.65□□□□□ -1.99
RNU4-53P-201ENST00000410828 LHX6Q9UPM6 363 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms