RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 AGPAT1Q99943 283 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 SUGCTQ9HAC7 445 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 RNF216Q9NWF9 866 aaPredicted RBP22.38■■□□□ 1.17
USP39-203ENST00000409470 RAB21Q9UL25 225 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 STYXL1Q9Y6J8 313 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 ZRANB2O95218 330 aaKnown RBP eCLIP22.38■■□□□ 1.17
USP39-203ENST00000409470 PIGRP01833 764 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 PAFAH1B1P43034 410 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 DNA2P51530 1060 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 DRP2Q13474 957 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 MEI1Q5TIA1 1274 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 ATP8B4Q8TF62 1192 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 PRPF31Q8WWY3 499 aaKnown RBP22.38■■□□□ 1.17
USP39-203ENST00000409470 PSPC1Q8WXF1 523 aaKnown RBP22.38■■□□□ 1.17
USP39-203ENST00000409470 MS4A4AQ96JQ5 239 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 NT5C1BQ96P26 610 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 FNBP1Q96RU3 617 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 TARS2Q9BW92 718 aaKnown RBP22.38■■□□□ 1.17
USP39-203ENST00000409470 TMEM134Q9H6X4 195 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 PDGFCQ9NRA1 345 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 ANKFY1Q9P2R3 1169 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 BTBD19C9JJ37 291 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 ADCY3O60266 1144 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 TUBBP07437 444 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 ACOT2P49753 483 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 NLRP11P59045 1033 aaKnown RBP22.37■■□□□ 1.17
USP39-203ENST00000409470 CBX1P83916 185 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 C2orf54Q08AI8 447 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 IER5Q5VY09 327 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 ARMCX2Q7L311 632 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 SCFD2Q8WU76 684 aa22.37■■□□□ 1.17
USP39-203ENST00000409470 ZBTB45Q96K62 511 aaPredicted RBP22.37■■□□□ 1.17
USP39-203ENST00000409470 A0A0A6YYK5 440 aaPredicted RBP22.36■■□□□ 1.17
USP39-203ENST00000409470 EXOC8Q8IYI6 725 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 SLC20A1Q8WUM9 679 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 TCP11Q8WWU5 503 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 KREMEN1Q96MU8 473 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 MSTO1Q9BUK6 570 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 SLC45A1Q9Y2W3 748 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 ERLIN1O75477 346 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 PSMD6Q15008 389 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 PLCB4Q15147 1175 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 TMEM63BQ5T3F8 832 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 LMBR1Q8WVP7 490 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 CTNNBL1Q8WYA6 563 aaPredicted RBP22.36■■□□□ 1.17
USP39-203ENST00000409470 SMARCAD1Q9H4L7 1026 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 PACSIN2Q9UNF0 486 aaPredicted RBP22.36■■□□□ 1.17
USP39-203ENST00000409470 TRPC6Q9Y210 931 aa22.36■■□□□ 1.17
USP39-203ENST00000409470 GAS2O43903 313 aaKnown RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 LDHAP00338 332 aaKnown RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 TMEM253P0C7T8 217 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 TNNI1P19237 187 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 ADORA2AP29274 412 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 ZNF572Q7Z3I7 529 aaPredicted RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 FAM71AQ8IYT1 594 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 TPCN2Q8NHX9 752 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 BRI3BPQ8WY22 251 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 HAPLN2Q9GZV7 340 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 GBA2Q9HCG7 927 aaPredicted RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 SIP14410 1827 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 ABCB4P21439 1286 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 EFNA5P52803 228 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 VSNL1P62760 191 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 CFAP221Q4G0U5 840 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 RPUSD2Q8IZ73 545 aaKnown RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 LRRC71Q8N4P6 559 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 HELQQ8TDG4 1101 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 TAF4BQ92750 862 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 RBAKQ9NYW8 714 aaPredicted RBP22.35■■□□□ 1.17
USP39-203ENST00000409470 IVNS1ABPQ9Y6Y0 642 aa22.35■■□□□ 1.17
USP39-203ENST00000409470 SGPL1O95470 568 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 SRGAP2CP0DJJ0 459 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 GCLCP48506 637 aaPredicted RBP22.34■■□□□ 1.17
USP39-203ENST00000409470 SLC26A2P50443 739 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 FKBP1BP68106 108 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 PRPF4BQ13523 1007 aaKnown RBP22.34■■□□□ 1.17
USP39-203ENST00000409470 MXD4Q14582 209 aaPredicted RBP22.34■■□□□ 1.17
USP39-203ENST00000409470 RPS6KA1Q15418 735 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 ZNF792Q3KQV3 632 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 LMBRD2Q68DH5 695 aaPredicted RBP22.34■■□□□ 1.17
USP39-203ENST00000409470 CCDC70Q6NSX1 233 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 SPATA4Q8NEY3 305 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 SHC3Q92529 594 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 TAS2R14Q9NYV8 317 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 SMARCAL1Q9NZC9 954 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 EHD2Q9NZN4 543 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 RNF14Q9UBS8 474 aa22.34■■□□□ 1.17
USP39-203ENST00000409470 DIS3Q9Y2L1 958 aaKnown RBP22.34■■□□□ 1.17
USP39-203ENST00000409470 A0A0B4J269 797 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 FAM170AA1A519 330 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 ZBTB42B2RXF5 422 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 CYP26A1O43174 497 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 EDN1P05305 212 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 ITIH3Q06033 890 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 LAMTOR4Q0VGL1 99 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 LONRF2Q1L5Z9 754 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 ANKRD23Q86SG2 305 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 PALB2Q86YC2 1186 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 LRRC57Q8N9N7 239 aa22.33■■□□□ 1.17
USP39-203ENST00000409470 HNRNPLLQ8WVV9 542 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms