RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 MPHOSPH6Q99547 160 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 POP1Q99575 1024 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 STK33Q9BYT3 514 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 NRBP2Q9NSY0 501 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 APEX2Q9UBZ4 518 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FBXL5Q9UKA1 691 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 BZW2Q9Y6E2 419 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 KIAA1217Q5T5P2 1943 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 RBAK-RBAKDNI3L0D1 243 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 NOP56O00567 594 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DLATP10515 647 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FERP16591 822 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SOX5P35711 763 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 USP8P40818 1118 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 RPIAP49247 311 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 MXI1P50539 228 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DNA2P51530 1060 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 MAP2K1Q02750 393 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 C1orf220Q5T0J3 134 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM63BQ5T3F8 832 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM160B1Q5W0V3 765 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PAPD7Q5XG87 772 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC39A4Q6P5W5 647 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 METTL7BQ6UX53 244 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 VPS36Q86VN1 386 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TRIM50Q86XT4 487 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 GPR161Q8N6U8 529 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 U2AF1L4Q8WU68 220 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 RABGGTAQ92696 567 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 COPS5Q92905 334 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 NOX5Q96PH1 765 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TMEM117Q9H0C3 514 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 AZI2Q9H6S1 392 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SUGCTQ9HAC7 445 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SEPT11Q9NVA2 429 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DDX41Q9UJV9 622 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 NAGPAQ9UK23 515 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 JRKLQ9Y4A0 524 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DOCK5Q9H7D0 1870 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 IGKV6D-21A0A0A0MT36 114 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ANO9A1A5B4 782 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TMCO5BA8MYB1 307 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 F8VZ95 297 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 K7ERI5 159 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 FOXN3O00409 490 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NCK2O43639 380 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GRIN3BO60391 1043 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 N4BP1O75113 896 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 RHOXF2BP0C7M4 288 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 H2AFXP16104 143 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ZSCAN20P17040 1043 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 GLRA2P23416 452 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CXCR5P32302 372 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 COPB2P35606 906 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRKCIP41743 596 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 MATR3P43243 847 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NOP2P46087 812 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LIG4P49917 911 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 RTP1P59025 263 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 STRN3Q13033 797 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 BRDTQ58F21 947 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LYPD8Q6UX82 237 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TAS1R3Q7RTX0 852 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ARHGEF19Q8IW93 802 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NOA1Q8NC60 698 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LMO3Q8TAP4 145 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CAGE1Q8TC20 777 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ASAP3Q8TDY4 903 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PARD3BQ8TEW8 1205 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ELMO3Q96BJ8 720 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 HVCN1Q96D96 273 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 FGD4Q96M96 766 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 SPATA33Q96N06 139 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 MMS19Q96T76 1030 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 RHOXF2Q9BQY4 288 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM213AQ9BRX8 229 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 BEGAINQ9BUH8 593 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PARD6BQ9BYG5 372 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 MROH8Q9H579 483 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 DHX33Q9H6R0 707 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PDGFCQ9NRA1 345 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TOPORSQ9NS56 1045 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ARGLU1Q9NWB6 273 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 ARHGAP28Q9P2N2 729 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 DNAJC25-GNG10A0A024R161 153 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CCL15-CCL14A0A0B4J2E2 113 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRIQ3A6PVS8 624 aaPredicted RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PDHXO00330 501 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 DDX3XO00571 662 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 MAPK13O15264 365 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 TXNP10599 105 aaKnown RBP4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRR20EP86478 221 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRR20CP86479 221 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRR20DP86480 221 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRR20BP86481 221 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 PRR20AP86496 221 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 DRP2Q13474 957 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 NAB2Q15742 525 aa4.31□□□□□ -1.72
LRRTM4-201ENST00000409088 CCL15Q16663 113 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms