RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ATP9AO75110 1047 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 PSMA2P25787 234 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 PPP1R18Q6NYC8 613 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 TMEM35BQ8NCS4 154 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 MCM8Q9UJA3 840 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 OVOS2A0A0G2JMS6 1433 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 AP1G2O75843 785 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 COILP38432 576 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-202ENST00000409031 VAMP7P51809 220 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 MECOMQ03112 1051 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CYP26B1Q9NR63 512 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 TESPA1A2RU30 521 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-202ENST00000409031 LRRIQ4A6NIV6 560 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 GOLGA8RI6L899 631 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CALB2P22676 271 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 TNFRSF8P28908 595 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 ALDH5A1P51649 535 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-202ENST00000409031 FOXO4P98177 505 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 IL1RL1Q01638 556 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 KCTD1Q719H9 257 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 KIAA2013Q8IYS2 634 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 FBXO25Q8TCJ0 367 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CCT7Q99832 543 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 C11orf70Q9BRQ4 267 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 IP6K2Q9UHH9 426 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CORO1CQ9ULV4 474 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CALB1P05937 261 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 TBCCQ15814 346 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 TAF1BQ53T94 588 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-202ENST00000409031 KLC3Q6P597 504 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 MCUQ8NE86 351 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 STK32AQ8WU08 396 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 CMTM5Q96DZ9 223 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 DHX36Q9H2U1 1008 aaKnown RBP18.71■□□□□ 0.59
SMPD4-202ENST00000409031 ZC4H2Q9NQZ6 224 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 MYMKA6NI61 221 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF233A6NK53 670 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 DEAF1O75398 565 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-202ENST00000409031 FAM153BP0C7A2 387 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 FAM153CQ494X1 144 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 CATSPER2Q96P56 530 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 MANSC1Q9H8J5 431 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 FAM153AQ9UHL3 310 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 GNPATO15228 680 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 CENPTQ96BT3 561 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-202ENST00000409031 ZWILCHQ9H900 591 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 FIS1Q9Y3D6 152 aa18.71■□□□□ 0.59
SMPD4-202ENST00000409031 TLR3O15455 904 aaKnown RBP18.71■□□□□ 0.58
SMPD4-202ENST00000409031 SRGAP2BP0DMP2 458 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 PECAM1P16284 738 aaPredicted RBP18.71■□□□□ 0.58
SMPD4-202ENST00000409031 HSPA13P48723 471 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 POLGP54098 1239 aaPredicted RBP18.71■□□□□ 0.58
SMPD4-202ENST00000409031 GTF2IP78347 998 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 STX3Q13277 289 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 CTTNQ14247 550 aaKnown RBP18.71■□□□□ 0.58
SMPD4-202ENST00000409031 P3H1Q32P28 736 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 ENOSF1Q7L5Y1 443 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 RHPN2Q8IUC4 686 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 ATP6V0A1Q93050 837 aa18.71■□□□□ 0.58
SMPD4-202ENST00000409031 POLR3CQ9BUI4 534 aaPredicted RBP18.71■□□□□ 0.58
SMPD4-202ENST00000409031 GOLGA8IPA6NC78 632 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 GOLGA8JA6NMD2 632 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 MAP4P27816 1152 aaKnown RBP18.7■□□□□ 0.58
SMPD4-202ENST00000409031 ARL4AP40617 200 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 KCNJ1P48048 391 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 ITGA8P53708 1063 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 KLHDC7AQ5VTJ3 777 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 SNX30Q5VWJ9 437 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 TRIM72Q6ZMU5 477 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 MREGQ8N565 214 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 AGAP11Q8TF27 550 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 EME1Q96AY2 570 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 PGM2Q96G03 612 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 APEX2Q9UBZ4 518 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 IPO11Q9UI26 975 aaKnown RBP18.7■□□□□ 0.58
SMPD4-202ENST00000409031 NRKQ7Z2Y5 1582 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 ESYT2A0FGR8 921 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 SLC9A1P19634 815 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 CDK8P49336 464 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 R3HDM1Q15032 1099 aaKnown RBP18.7■□□□□ 0.58
SMPD4-202ENST00000409031 TLR10Q9BXR5 811 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 C10orf88Q9H8K7 445 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 DDX56Q9NY93 547 aaKnown RBP18.7■□□□□ 0.58
SMPD4-202ENST00000409031 SERPINB13Q9UIV8 391 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 LRRC10BA6NIK2 292 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 NMT2O60551 498 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 KRT7P08729 469 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 FAM200BP0CF97 657 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 NPEPPSP55786 919 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 CEP19Q96LK0 163 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 ASCC2Q9H1I8 757 aaPredicted RBP18.7■□□□□ 0.58
SMPD4-202ENST00000409031 VPS11Q9H270 941 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 GLI2P10070 1586 aa18.7■□□□□ 0.58
SMPD4-202ENST00000409031 SYCE1LA8MT33 242 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms