RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 HPS3Q969F9 1004 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 SAMD11Q96NU1 681 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 GAD1Q99259 594 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 CUEDC2Q9H467 287 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 CWH43Q9H720 699 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 PANK4Q9NVE7 773 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 KBTBD4Q9NVX7 518 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 PARP2Q9UGN5 583 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 GDAQ9Y2T3 454 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 RBM19Q9Y4C8 960 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 TRANK1O15050 2925 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 MYO7AQ13402 2215 aa11.29□□□□□ -0.6
TSPAN9-202ENST00000407263 TISP43B9A030 160 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 H0YCG3 227 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 LPXNO60711 386 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 OFD1O75665 1012 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 GCNT3O95395 438 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 MYBP10242 640 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 GAP43P17677 238 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 LAG3P18627 525 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 CMA1P23946 247 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 SYKP43405 635 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 LIG4P49917 911 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 CASP5P51878 434 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 CCDC85BQ15834 202 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 THNSL1Q8IYQ7 743 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 CNNM3Q8NE01 707 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 ACO2Q99798 780 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 C11orf84Q9BUA3 381 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 IKZF4Q9H2S9 585 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 MRPL44Q9H9J2 332 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 SNTG2Q9NY99 539 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 CHMP5Q9NZZ3 219 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 HPSEQ9Y251 543 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
TSPAN9-202ENST00000407263 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 GOLGA6L4A6NEF3 574 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 ARL5CA6NH57 179 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 H3BNC9 293 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 ABLIM1O14639 778 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 GRM6O15303 877 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 SLC34A2O95436 690 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 BMPR1AP36894 532 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 CUL4BQ13620 913 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 CCDC65Q8IXS2 484 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 GLIS3Q8NEA6 775 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 ZNF558Q96NG5 402 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 TCHPQ9BT92 498 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 CXCL16Q9H2A7 254 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 MAGEF1Q9HAY2 307 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 CACNG4Q9UBN1 327 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 TBX20Q9UMR3 447 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
TSPAN9-202ENST00000407263 C5orf67F2Z3F1 127 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 ITGB1P05556 798 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 PROZP22891 400 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 BCAR1P56945 870 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 AMPD3Q01432 767 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 KCNA1Q09470 495 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 SLC39A4Q6P5W5 647 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 KCNT2Q6UVM3 1135 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 APBB1IPQ7Z5R6 666 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 TMEM173Q86WV6 379 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 ZNF280BQ86YH2 543 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 MAP4K3Q8IVH8 894 aa11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 FAM193BQ96PV7 902 aaPredicted RBP11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 NTPCRQ9BSD7 190 aaKnown RBP11.26□□□□□ -0.61
TSPAN9-202ENST00000407263 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms