RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 GTF2BQ00403 316 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 PTK7Q13308 1070 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 TFDP1Q14186 410 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 MXD4Q14582 209 aaPredicted RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 GPNMBQ14956 572 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 PPP2R5AQ15172 486 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 ZNF618Q5T7W0 954 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 AOPEPQ8N6M6 819 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 CPB2Q96IY4 423 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 ZBTB45Q96K62 511 aaPredicted RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 ACCSQ96QU6 501 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 NTPCRQ9BSD7 190 aaKnown RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 STRA6Q9BX79 667 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 CELF4Q9BZC1 486 aaKnown RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 INO80BQ9C086 356 aaPredicted RBP9.16□□□□□ -0.94
GPC3-203ENST00000406757 PCIF1Q9H4Z3 704 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 IFT122Q9HBG6 1241 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 OLFML3Q9NRN5 406 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 ARHGAP28Q9P2N2 729 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 SEL1LQ9UBV2 794 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 TBX20Q9UMR3 447 aa9.16□□□□□ -0.94
GPC3-203ENST00000406757 TANC1Q9C0D5 1861 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 TGFB1I1O43294 461 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 PPP1R37O75864 691 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 BAIAP3O94812 1187 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 PRKCBP05771 671 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 PHKA2P46019 1235 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 KCNJ6P48051 423 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 ZNF165P49910 485 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 PTENP60484 403 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 WDR5P61964 334 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 DEFB103AP81534 67 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 MRPS6P82932 125 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 MBTD1Q05BQ5 628 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 MGAT3Q09327 533 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 PAK1Q13153 545 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 STIM1Q13586 685 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 TCTN1Q2MV58 587 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 TAF2Q6P1X5 1199 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 LRRC8DQ7L1W4 858 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 ZBTB33Q86T24 672 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 LUZP1Q86V48 1076 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 CREBRFQ8IUR6 639 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 ZBTB8OSQ8IWT0 167 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 NME8Q8N427 588 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 CAGE1Q8TC20 777 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 NOC3LQ8WTT2 800 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 P2RX5Q93086 422 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 BICD1Q96G01 975 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 DHTKD1Q96HY7 919 aaPredicted RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 ZBED2Q9BTP6 218 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 TARS2Q9BW92 718 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 GCOM2Q9BZD3 368 aaPredicted RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 KCTD10Q9H3F6 313 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 C17orf75Q9HAS0 396 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 NOC2LQ9Y3T9 749 aaKnown RBP9.15□□□□□ -0.94
GPC3-203ENST00000406757 TRPV2Q9Y5S1 764 aa9.15□□□□□ -0.94
GPC3-203ENST00000406757 TCF20Q9UGU0 1960 aaKnown RBP9.15□□□□□ -0.95
GPC3-203ENST00000406757 ZMYM2Q9UBW7 1377 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 M0QZ92 97 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 PSMA7O14818 248 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 LPXNO60711 386 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 NBNO60934 754 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 GHRP10912 638 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 CKBP12277 381 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 DARSP14868 501 aaKnown RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 SELPP16109 830 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 IBSPP21815 317 aaPredicted RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 CCNE1P24864 410 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 CRYBB1P53674 252 aaPredicted RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 STRN3Q13033 797 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 IQCB1Q15051 598 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 BMT2Q1RMZ1 405 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 SEZ6Q53EL9 994 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 EEF1DP3Q658K8 133 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 CDCA2Q69YH5 1023 aaPredicted RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 SLC39A4Q6P5W5 647 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 RSPH3Q86UC2 560 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 GDPD5Q8WTR4 605 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 HLA-CQ95604 372 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 C1QTNF1Q9BXJ1 281 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 CCDC113Q9H0I3 377 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 C2orf40Q9H1Z8 148 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms